RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CMTR2Q8IYT2 770 aaKnown RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 TRUB1Q8WWH5 349 aaKnown RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 NINJ1Q92982 152 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 GAL3ST3Q96A11 431 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 NAA11Q9BSU3 229 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 CENPOQ9BU64 300 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ZDHHC2Q9UIJ5 367 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 SCML1Q9UN30 329 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF638Q14966 1978 aaKnown RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF701M0R085 212 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 CNTN5O94779 1100 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 GJA1P17302 382 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 GNG2P59768 71 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 PCLAFQ15004 111 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 CHRNA6Q15825 494 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 OGFOD2Q6N063 350 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 POMZP3Q6PJE2 187 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ENPP7Q6UWV6 458 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 C1orf52Q8N6N3 182 aaKnown RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 URM1Q9BTM9 101 aaKnown RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 FAM149AA5PLN7 773 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 SLC22A31A6NKX4 558 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 SLC33A1O00400 549 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 TMEM63AO94886 807 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 POU2F1P14859 743 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 IST1P53990 364 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 OR12D2P58182 307 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 HSD11B2P80365 405 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 AGTRAPQ6RW13 159 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 METTL25Q8N6Q8 603 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ELAC1Q9H777 363 aaKnown RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 COL20A1Q9P218 1284 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 SALL4Q9UJQ4 1053 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 HS3ST4Q9Y661 456 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 FAM170BA6NMN3 283 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 B8ZZF3 427 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF182P17025 639 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 PHC1P78364 1004 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF805Q5CZA5 627 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 DGLUCYQ7Z3D6 616 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 SERINC5Q86VE9 423 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 MAPK15Q8TD08 544 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 SIPA1Q96FS4 1042 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 ABCG8Q9H221 673 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 PNO1Q9NRX1 252 aaKnown RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 PCDHGA12O60330 932 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 HNRNPA1P09651 372 aaKnown RBP eCLIP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 NPR2P20594 1047 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 S100PP25815 95 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 SLC6A9P48067 706 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 NRROSQ86YC3 692 aa8.55□□□□□ -1.04
LSAMP-205ENST00000490035 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.55□□□□□ -1.04
LSAMP-205ENST00000490035 BLACEA4D250 179 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PEX10O60683 326 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 IFNA1P01562 189 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 FMO3P31513 532 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ARSFP54793 590 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 GSCP56915 257 aaPredicted RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PRKCDQ05655 676 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 RCAN2Q14206 197 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 LYSMD3Q7Z3D4 306 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ZFAND4Q86XD8 727 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 MARVELD2Q8N4S9 558 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ATP6V1C2Q8NEY4 427 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 C7orf43Q8WVR3 580 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 DAZLQ92904 295 aaKnown RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PHB2Q99623 299 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 HDHD5Q9BXW7 423 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PITHD1Q9GZP4 211 aaPredicted RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 XKR8Q9H6D3 395 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 FBXL12Q9NXK8 326 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 YIPF1Q9Y548 306 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 MUSKO15146 869 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 CHRNA1P02708 482 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 PPP2R2DQ66LE6 453 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 RASGRP3Q8IV61 690 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 FANK1Q8TC84 345 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 HSPA12BQ96MM6 686 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 HCN2Q9UL51 889 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 NOP16Q9Y3C1 178 aaKnown RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 RNF225M0QZC1 329 aaPredicted RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 DLX3O60479 287 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 CLCNKAP51800 687 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 IRF9Q00978 393 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ZNF460Q14592 562 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 MFSD13AQ14CX5 517 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 EIF4HQ15056 248 aaKnown RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 SMURF1Q9HCE7 757 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 TLR9Q9NR96 1032 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 B4GALT7Q9UBV7 327 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 UBQLN2Q9UHD9 624 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 E7ESA3 106 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 LATO43561 262 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 HCKP08631 526 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 ARRB1P49407 418 aaPredicted RBP8.54□□□□□ -1.04
LSAMP-205ENST00000490035 HFE2Q6ZVN8 426 aa8.54□□□□□ -1.04
LSAMP-205ENST00000490035 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms