RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 DEPDC1Q5TB30 811 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 LETMD1Q6P1Q0 360 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 FRMD7Q6ZUT3 714 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 GPRIN3Q6ZVF9 776 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 PPP1R32Q7Z5V6 425 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 OR4F6Q8NGB9 312 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 TBC1D20Q96BZ9 403 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 SERPINI1Q99574 410 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 YIPF2Q9BWQ6 316 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 AICDAQ9GZX7 198 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 GSTO2Q9H4Y5 243 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 KLHL31Q9H511 634 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 ELOVL6Q9H5J4 265 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 SOX17Q9H6I2 414 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-212ENST00000489728 COPS7BQ9H9Q2 264 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-212ENST00000489728 BRF2Q9HAW0 419 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 LYRM4Q9HD34 91 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 HCN3Q9P1Z3 774 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 C3orf18Q9UK00 162 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 HS3ST3B1Q9Y662 390 aa10.47□□□□□ -0.73
CPSF7-212ENST00000489728 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 ATMQ13315 3056 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 MAGEB17A8MXT2 336 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 C4orf51C9J302 202 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 PSMD12O00232 456 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 CHST10O43529 356 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 KRT6AP02538 564 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 KRT6BP04259 564 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 HEXBP07686 556 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 FHP07954 510 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 ACPPP15309 386 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 OTX2P32243 289 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 KRT6CP48668 564 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 RAP1GDS1P52306 607 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 NAGLUP54802 743 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 EMP2P54851 167 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 CDH13P55290 713 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 POLE2P56282 527 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 SOX8P57073 446 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 RAB8AP61006 207 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 AP2B1P63010 937 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 SNRPNP63162 240 aaKnown RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 BTN3A2P78410 334 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 MAT1AQ00266 395 aaKnown RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 GALNT1Q10472 559 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 ATP1A4Q13733 1029 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 VWA2Q5GFL6 755 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 CFAP157Q5JU67 520 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 ATP1A1-AS1Q5TC04 95 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 TTC19Q6DKK2 380 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 ADNP2Q6IQ32 1131 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 TMEM205Q6UW68 189 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 QSOX2Q6ZRP7 698 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 ZCCHC7Q8N3Z6 543 aaKnown RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 CLEC1AQ8NC01 280 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 ARMC2Q8NEN0 867 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 TCP10LQ8TDR4 215 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 TRPC4APQ8TEL6 797 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 AGAP11Q8TF27 550 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 METTL21AQ8WXB1 218 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 EXTL1Q92935 676 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 RGMAQ96B86 450 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 CDK15Q96Q40 435 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 F2RL3Q96RI0 385 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 ARHGAP9Q9BRR9 750 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 LANCL2Q9NS86 450 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 NMRK1Q9NWW6 199 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 P4HTMQ9NXG6 502 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 MS4A12Q9NXJ0 267 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 C19orf25Q9UFG5 118 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 MKL2Q9ULH7 1088 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 G3BP2Q9UN86 482 aaKnown RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 MRPS33Q9Y291 106 aaKnown RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 MMACHCQ9Y4U1 282 aa10.46□□□□□ -0.73
CPSF7-212ENST00000489728 PCDHGA9Q9Y5G4 932 aaKnown RBP10.46□□□□□ -0.73
CPSF7-212ENST00000489728 SERTM1A2A2V5 107 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 ZNF860A6NHJ4 632 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 MKRN2OSH3BPM6 223 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 SOCS6O14544 535 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 TRIM13O60858 407 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 CEACAM4O75871 244 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 SNUPNO95149 360 aaKnown RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 ZWINTO95229 277 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 HPP00738 406 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 TGFB1P01137 390 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 C8orf89P0DMQ9 161 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 H2AFXP16104 143 aaPredicted RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 HIST1H1TP22492 207 aaPredicted RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 ATP5A1P25705 553 aaKnown RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 SSR2P43308 183 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 PLA2G16P53816 162 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 RAB38P57729 211 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 RHAGQ02094 409 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 CSTF3Q12996 717 aaKnown RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 AIMP2Q13155 320 aaKnown RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 KCNAB2Q13303 367 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 DDX39BQ13838 428 aaKnown RBP10.45□□□□□ -0.74
CPSF7-212ENST00000489728 CASP8Q14790 479 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 SYT16Q17RD7 645 aa10.45□□□□□ -0.74
CPSF7-212ENST00000489728 AP5B1Q2VPB7 878 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms