RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 SATB2Q9UPW6 733 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 SYNJ1O43426 1573 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 MUC6Q6W4X9 2439 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 MKI67P46013 3256 aaKnown RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 RNF123Q5XPI4 1314 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 EIF4G3O43432 1585 aaKnown RBP3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 hCG_38984A0A1B0GV85 526 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 C2orf92A0A1B0GVN3 265 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 LRRD1A4D1F6 860 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 ANKDD1BA6NHY2 528 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 TTI1O43156 1089 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 FMO6PO60774 539 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 GLCEO94923 617 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 KRT3P12035 628 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 CTNNB1P35222 781 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 SERPINB6P35237 376 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 SLC1A3P43003 542 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 MAGEB1P43366 347 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 CLK1P49759 484 aaKnown RBP3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 HUNKP57058 714 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 FKBP1BP68106 108 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 DHODHQ02127 395 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 SLC34A1Q06495 639 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 ARHGAP1Q07960 439 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 NECTIN1Q15223 517 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 FAM189A2Q15884 450 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 LRRC37A5PQ49AS3 106 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 ZNF789Q5FWF6 425 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 ZC2HC1BQ5TFG8 222 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 SLC27A4Q6P1M0 643 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 TRIM65Q6PJ69 517 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 NHLRC1Q6VVB1 395 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 KCTD9Q7L273 389 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 SIAH3Q8IW03 269 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 UNC45BQ8IWX7 931 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 TDHQ8IZJ6 230 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 C10orf53Q8N6V4 93 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 CHURC1Q8WUH1 139 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 CASP10Q92851 521 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 RFT1Q96AA3 541 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 AP2M1Q96CW1 435 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 SNRNP40Q96DI7 357 aaKnown RBP3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 POM121L2Q96KW2 1035 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 LINC00479Q96M42 142 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 FAM218AQ96MZ4 157 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 SLC39A8Q9C0K1 460 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 MTIF3Q9H2K0 278 aaKnown RBP3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 MED20Q9H944 212 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 IL1RAPL2Q9NP60 686 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 GPR173Q9NS66 373 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 CWC25Q9NXE8 425 aaPredicted RBP3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 CNIH4Q9P003 139 aa3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 DBF4Q9UBU7 674 aaPredicted RBP3.01□□□□□ -1.93
AC055855.1-201ENST00000489563 ZFHX2Q9C0A1 2572 aaPredicted RBP3□□□□□ -1.93
AC055855.1-201ENST00000489563 MAGEB16A2A368 324 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 CCDC162PA2VCL2 907 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 NKX6-3A6NJ46 265 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 KPNA7A9QM74 516 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 ZNF732B4DXR9 585 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 TCP10L2B9ZVM9 353 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 M0R296 226 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 CEACAM4O75871 244 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 LETM1O95202 739 aaPredicted RBP3□□□□□ -1.93
AC055855.1-201ENST00000489563 ZSCAN5DPP0CG00 497 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 UROSP10746 265 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 CPA3P15088 417 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 GIFP27352 417 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 SRD5A2P31213 254 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 BTG1P62324 171 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 IRX4P78413 519 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 GRB14Q14449 540 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 MAPK11Q15759 364 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 ACKR1Q16570 336 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 FUT11Q495W5 492 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 C14orf177Q52M58 125 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 FASTKD1Q53R41 847 aaKnown RBP3□□□□□ -1.93
AC055855.1-201ENST00000489563 TCEAL6Q6IPX3 200 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 GSG1LQ6UXU4 331 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 SIGLEC15Q6ZMC9 328 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 KIF6Q6ZMV9 814 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 FRRS1Q6ZNA5 592 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 C17orf107Q6ZR85 190 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 RFPL4BQ6ZWI9 263 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 CATSPERDQ86XM0 798 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 ZC3H3Q8IXZ2 948 aaKnown RBP3□□□□□ -1.93
AC055855.1-201ENST00000489563 KLHDC8AQ8IYD2 350 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 TEX26Q8N6G2 289 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 TMEM99Q8N816 258 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 RPLP0P6Q8NHW5 317 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 SPATA18Q8TC71 538 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 SEPT8Q92599 483 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 PTP4A1Q93096 173 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 RASL10BQ96S79 203 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 PCDHB18PQ96TA0 734 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 SYT11Q9BT88 431 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 MCRIP2Q9BUT9 160 aaKnown RBP3□□□□□ -1.93
AC055855.1-201ENST00000489563 CACNG6Q9BXT2 260 aa3□□□□□ -1.93
AC055855.1-201ENST00000489563 FGFBP2Q9BYJ0 223 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms