RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ESRRBO95718 433 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 EIF2S1P05198 315 aaKnown RBP10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 JUNP05412 331 aaKnown RBP10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 FGF4P08620 206 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 CDH1P12830 882 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 MMP11P24347 488 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 CCND1P24385 295 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 VARSP26640 1264 aaKnown RBP10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 ARF3P61204 181 aaPredicted RBP10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 DOC2AQ14183 400 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 NKG7Q16617 165 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 PRTGQ2VWP7 1150 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 GGTA1PQ4G0N0 100 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 CFAP157Q5JU67 520 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 TCHHL1Q5QJ38 904 aaPredicted RBP10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 DCAF10Q5QP82 559 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 GARNL3Q5VVW2 1013 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 KANK2Q63ZY3 851 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 C6orf89Q6UWU4 347 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 COX15Q7KZN9 410 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 PPP1R32Q7Z5V6 425 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 CSNK1A1LQ8N752 337 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 SNX31Q8N9S9 440 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 FDCSPQ8NFU4 85 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 ABHD11Q8NFV4 315 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 OR4F6Q8NGB9 312 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 OR4K1Q8NGD4 311 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 PPP1R14CQ8TAE6 165 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 SLC5A11Q8WWX8 675 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 RERGQ96A58 199 aaPredicted RBP10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 MVB12AQ96EY5 273 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 VPS50Q96JG6 964 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 SPSB2Q99619 263 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 SIKE1Q9BRV8 207 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 TUBB6Q9BUF5 446 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 ZNF304Q9HCX3 659 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 PNPOQ9NVS9 261 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 C5AR2Q9P296 337 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 RNF11Q9Y3C5 154 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 RAP2CQ9Y3L5 183 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 A6NL46 340 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 VSTM2BA6NLU5 285 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 CCT8L1PA6NM43 557 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 DCTN3O75935 186 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ATP5HO75947 161 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 SNUPNO95149 360 aaKnown RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 HSPA4LO95757 839 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 MLYCDO95822 493 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 OTCP00480 354 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ALPPP05187 535 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 FBLP22087 321 aaKnown RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 OR1D4P47884 311 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 PIK3CGP48736 1102 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 HTR6P50406 440 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 PKNOX1P55347 436 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 SOX8P57073 446 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 CSNK1G2P78368 415 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 FOXK1P85037 733 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 REEP5Q00765 189 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 OCA2Q04671 838 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 IFT88Q13099 833 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 CHIT1Q13231 466 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 TBCCQ15814 346 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 RBBP7Q16576 425 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 SPDYAQ5MJ70 313 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 VWA5B1Q5TIE3 1220 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ATG9BQ674R7 924 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 CLEC6AQ6EIG7 209 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ADNP2Q6IQ32 1131 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 NXPE4Q6UWF7 544 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 GPRIN3Q6ZVF9 776 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ADCK2Q7Z695 626 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 GALNT16Q8N428 558 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 METTL27Q8N6F8 245 aaPredicted RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ZNF740Q8NDX6 193 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 PPP4R1Q8TF05 950 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 COL26A1Q96A83 441 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 C10orf90Q96M02 699 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 OR2A5Q96R48 311 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 SMAD5Q99717 465 aaKnown RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 HAUS8Q9BT25 410 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 NUDT9Q9BW91 350 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 TUBB1Q9H4B7 451 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 EHD1Q9H4M9 534 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 PELI2Q9HAT8 420 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 MID1IP1Q9NPA3 183 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ATP13A2Q9NQ11 1180 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 SEMA3GQ9NS98 782 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ABCF3Q9NUQ8 709 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 TMEM184CQ9NVA4 438 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 FGFR1OP2Q9NVK5 253 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 CTSFQ9UBX1 484 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ZNF282Q9UDV7 671 aaPredicted RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 TRPS1Q9UHF7 1281 aa10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 ZNF490Q9ULM2 529 aaPredicted RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 RUVBL1Q9Y265 456 aaKnown RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 RRP15Q9Y3B9 282 aaKnown RBP10.01□□□□□ -0.81
SCAMP4-208ENST00000489554 KCNE2Q9Y6J6 123 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms