RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 DOCK7Q96N67 2140 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 TRGV5A0A0B4J1U4 118 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 SH3D21A4FU49 640 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 A8MVJ9 347 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 HACD1B0YJ81 288 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 H7BY64 318 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 PRKNO60260 465 aaPredicted RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 SIX3O95343 332 aaPredicted RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 GOT2P00505 430 aaKnown RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 H2AFZP0C0S5 128 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 MAOAP21397 527 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 DNASE1L1P49184 302 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 OLR1P78380 273 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 FOXO1Q12778 655 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 TNK1Q13470 666 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 SLC10A1Q14973 349 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 ACKR1Q16570 336 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 ZNF750Q32MQ0 723 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 ACSF3Q4G176 576 aaPredicted RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 ODF2Q5BJF6 829 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 LRRC38Q5VT99 294 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 IL20RBQ6UXL0 311 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 GK5Q6ZS86 529 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 H2AFVQ71UI9 128 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 LDB1Q86U70 411 aaPredicted RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 OR9A1PQ8NGU1 263 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 GSDMBQ8TAX9 411 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 TBC1D20Q96BZ9 403 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 CALR3Q96L12 384 aaKnown RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 PTCHD1Q96NR3 888 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 NAP1L5Q96NT1 182 aaPredicted RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 PRAP1Q96NZ9 151 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 FAM173AQ9BQD7 235 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 HPF1Q9NWY4 346 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 UTP6Q9NYH9 597 aaKnown RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 C6orf203Q9P0P8 240 aaPredicted RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 LCMT1Q9UIC8 334 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 EIF3LQ9Y262 564 aaKnown RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 MRFAP1Q9Y605 127 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 BZW2Q9Y6E2 419 aaKnown RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 RAI1Q7Z5J4 1906 aaPredicted RBP8.47□□□□□ -1.05
SSBP1-212ENST00000489378 SVEP1Q4LDE5 3571 aa8.47□□□□□ -1.05
SSBP1-212ENST00000489378 IGKV3D-11A0A0A0MRZ8 115 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 H7C0C1 242 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 HCN1O60741 890 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 OR2J2O76002 312 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 CCNDBP1O95273 360 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 EPPINO95925 133 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 B3GALT4O96024 378 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 SERPING1P05155 500 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 CNR1P21554 472 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 IL10P22301 178 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 SOX3P41225 446 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 ATP5OP48047 213 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 CLCN2P51788 898 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 SRSF2Q01130 221 aaKnown RBP8.46□□□□□ -1.05
SSBP1-212ENST00000489378 HYAL4Q2M3T9 481 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 ZNF534Q76KX8 674 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 FBXW8Q8N3Y1 598 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 OR13J1Q8NGT2 312 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 MAGEC3Q8TD91 643 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 ASB15Q8WXK1 588 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 CTNNBL1Q8WYA6 563 aaPredicted RBP8.46□□□□□ -1.05
SSBP1-212ENST00000489378 ISL2Q96A47 359 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 ALS2CR12Q96Q35 445 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 PKP4Q99569 1192 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 WDR83Q9BRX9 315 aaKnown RBP8.46□□□□□ -1.05
SSBP1-212ENST00000489378 SLC6A15Q9H2J7 730 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 YAE1D1Q9NRH1 226 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 TUBA8Q9NY65 449 aaPredicted RBP8.46□□□□□ -1.05
SSBP1-212ENST00000489378 DDX56Q9NY93 547 aaKnown RBP8.46□□□□□ -1.05
SSBP1-212ENST00000489378 JKAMPQ9P055 326 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 SLC2A6Q9UGQ3 507 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 YARS2Q9Y2Z4 477 aaKnown RBP8.46□□□□□ -1.05
SSBP1-212ENST00000489378 MGAM2Q2M2H8 2515 aa8.46□□□□□ -1.05
SSBP1-212ENST00000489378 hCG_1818297A0A087WSY0 165 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 KCNE1BA0A087WTH5 132 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 TCRBV16S1A1N1A0A5B0 115 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 MYO1CO00159 1063 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 CHST10O43529 356 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 KIF5CO60282 957 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 MYO1DO94832 1006 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 SOX30O94993 753 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 FPR1P21462 350 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 TIMP3P35625 211 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 CYLC1P35663 651 aaPredicted RBP8.46□□□□□ -1.06
SSBP1-212ENST00000489378 PNLIPRP1P54315 467 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 ABATP80404 500 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 CHRFAM7AQ494W8 412 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 ANKRD20A4Q4UJ75 823 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 KCTD11Q693B1 232 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 ABHD13Q7L211 337 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 GPALPP1Q8IXQ4 340 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 KLHDC8BQ8IXV7 354 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 B3GNT7Q8NFL0 401 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 OR6P1Q8NGX9 317 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 SLC35G2Q8TBE7 412 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 TM4SF19Q96DZ7 209 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 FOPNLQ96NB1 174 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 TTC1Q99614 292 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms