RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZNF30P17039 623 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 GDI1P31150 447 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 ATXN7L3Q14CW9 347 aaPredicted RBP16.99■□□□□ 0.31
NPHP4-209ENST00000489180 TCEAL1Q15170 157 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 SPATS1Q496A3 300 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 C6orf141Q5SZD1 244 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 POLMQ9NP87 494 aaPredicted RBP16.99■□□□□ 0.31
NPHP4-209ENST00000489180 WDR37Q9Y2I8 494 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 NPIPA5E9PKD4 350 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 M0R036 132 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 PIRO00625 290 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 HTR1AP08908 422 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 HAPLN1P10915 354 aaPredicted RBP16.99■□□□□ 0.31
NPHP4-209ENST00000489180 LEPRP48357 1165 aaKnown RBP16.99■□□□□ 0.31
NPHP4-209ENST00000489180 ABRAXAS2Q15018 415 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 TMEM130Q8N3G9 435 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 REEP4Q9H6H4 257 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 STOX2Q9P2F5 926 aaPredicted RBP16.99■□□□□ 0.31
NPHP4-209ENST00000489180 NPIPA1Q9UND3 350 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 MGAT4BQ9UQ53 548 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 BOLA2-SMG1P6H3BVE0 249 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 OR12D1P0DN82 309 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 TEAD2Q15562 447 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 MSANTD1Q6ZTZ1 278 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 GPRIN1Q7Z2K8 1008 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 GNPDA2Q8TDQ7 276 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 AIFM2Q9BRQ8 373 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 ZNF350Q9GZX5 532 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 BTBD1Q9H0C5 482 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 KCNH6Q9H252 994 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 POPDC3Q9HBV1 291 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 PAK1IP1Q9NWT1 392 aaPredicted RBP16.99■□□□□ 0.31
NPHP4-209ENST00000489180 EXTL2Q9UBQ6 330 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.99■□□□□ 0.31
NPHP4-209ENST00000489180 H0YAE9 185 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 EDNRBP24530 442 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 ANKFN1Q8N957 763 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 OR2L2Q8NH16 312 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 XYLT2Q9H1B5 865 aa16.99■□□□□ 0.31
NPHP4-209ENST00000489180 H7BY64 318 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 OR4D2P58180 307 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 GTF2IRD2BQ6EKJ0 949 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 SHQ1Q6PI26 577 aaKnown RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 GTF2IRD2Q86UP8 949 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 SAMD12Q8N8I0 201 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 OR8J3Q8NGG0 315 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 ZFAND2BQ8WV99 257 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 PRAP1Q96NZ9 151 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 GRHPRQ9UBQ7 328 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 BLKP51451 505 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 RPP38P78345 283 aaKnown RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 MAD2L1BPQ15013 274 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 SPIN3Q5JUX0 258 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 FAM43BQ6ZT52 329 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 CARM1Q86X55 608 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 POGLUT1Q8NBL1 392 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 CASTOR1Q8WTX7 329 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 DNAJA3Q96EY1 480 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 S100A16Q96FQ6 103 aaKnown RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 MCHR1Q99705 422 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 Q9N2J8 555 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 PCDHB14Q9Y5E9 798 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 KAT7O95251 611 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 MT-ND5P03915 603 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 CCND3P30281 292 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 HNF1BP35680 557 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 FNTBP49356 437 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 ZNF33AQ06730 810 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 GRK1Q15835 563 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 PUS10Q3MIT2 529 aaKnown RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 Q6ZVL8 140 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 MARCH4Q9P2E8 410 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 EXOSC1Q9Y3B2 195 aaKnown RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 EDDM13A0A1B0GTR0 161 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 COQ9O75208 318 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 VNN2O95498 520 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 MT-ND2P03891 347 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 LCN1P31025 176 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 SOX2P48431 317 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 GDI2P50395 445 aaKnown RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 SGCBQ16585 318 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 MARVELD2Q8N4S9 558 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 PLA2G15Q8NCC3 412 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 MMP27Q9H306 513 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 TAS2R10Q9NYW0 307 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 PCDHB11Q9Y5F2 797 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 MEN1O00255 615 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 CELP19835 753 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 EIF5AP63241 154 aaKnown RBP16.98■□□□□ 0.31
NPHP4-209ENST00000489180 UBXN2BQ14CS0 331 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 ENPP6Q6UWR7 440 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 CCDC116Q8IYX3 515 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 OR5J2Q8NH18 312 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 OSTF1Q92882 214 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 XKR8Q9H6D3 395 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 VNN3Q9NY84 501 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 WDR45Q9Y484 360 aa16.98■□□□□ 0.31
NPHP4-209ENST00000489180 SORBS2O94875 1100 aaKnown RBP16.97■□□□□ 0.31
NPHP4-209ENST00000489180 ADH7P40394 386 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms