RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 DNAJC14Q6Y2X3 702 aaPredicted RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 PRR23CQ6ZRP0 262 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 CAMKMTQ7Z624 323 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 MCATQ8IVS2 390 aaKnown RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 OR4N4Q8N0Y3 316 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 ZCCHC7Q8N3Z6 543 aaKnown RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 ACOT4Q8N9L9 421 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 KCT2Q8NC54 265 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 VPS37AQ8NEZ2 397 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 OR8K5Q8NH50 307 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 NUDT8Q8WV74 236 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 CCDC124Q96CT7 223 aaKnown RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 LRRC58Q96CX6 371 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 TM4SF19Q96DZ7 209 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 MTERF3Q96E29 417 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 CLPTM1LQ96KA5 538 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 CDRT15Q96T59 188 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 SLC39A3Q9BRY0 314 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 DUSP26Q9BV47 211 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 ZNF717Q9BY31 904 aaPredicted RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 SYNPO2LQ9H987 977 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 LHX9Q9NQ69 397 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 SH3BP4Q9P0V3 963 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 MAP10Q9P2G4 905 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 ATP6V1HQ9UI12 483 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 PLCL2Q9UPR0 1127 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 L3MBTL1Q9Y468 752 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 PCDHGA7Q9Y5G6 932 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 CACNA1IQ9P0X4 2223 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 EML5Q05BV3 1969 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 MN1Q10571 1320 aaPredicted RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 ABCA7Q8IZY2 2146 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 A0A096LPI6 279 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 IGHV5-51A0A0C4DH38 117 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 C4orf51C9J302 202 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 FXYD1O00168 92 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 RFXANKO14593 260 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 NVLO15381 856 aaKnown RBP9.52□□□□□ -0.89
USP11-211ENST00000489111 B4GAT1O43505 415 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 B3GALT2O43825 422 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 TMPRSS11DO60235 418 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 SRPX2O60687 465 aaPredicted RBP9.52□□□□□ -0.89
USP11-211ENST00000489111 ERN1O75460 977 aaKnown RBP9.52□□□□□ -0.89
USP11-211ENST00000489111 SCELO95171 688 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 ANP32DO95626 131 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 C9P02748 559 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 RPLP0P05388 317 aaKnown RBP9.52□□□□□ -0.89
USP11-211ENST00000489111 RETP07949 1114 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 FURINP09958 794 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 ZNF883P0CG24 379 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 LAMP1P11279 417 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 ALOX12P18054 663 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 DDCP20711 480 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 CD1CP29017 333 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 CSF2RBP32927 897 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 HSD11B2P80365 405 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 PLIN5Q00G26 463 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 SLAMF1Q13291 335 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 PDE7AQ13946 482 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 NDUFA9Q16795 377 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 DEFB134Q4QY38 66 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 TMTC4Q5T4D3 741 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 C1orf146Q5VVC0 180 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 ZNF793Q6ZN11 406 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 USP53Q70EK8 1073 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 PRSS42Q7Z5A4 293 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 ANKRD46Q86W74 232 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 TICAM1Q8IUC6 712 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 FBXW8Q8N3Y1 598 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 DNAJC22Q8N4W6 341 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 EFCAB3Q8N7B9 438 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 FAM13CQ8NE31 585 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 OR8J2Q8NGG1 315 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP11-211ENST00000489111 UTP15Q8TED0 518 aaKnown RBP9.52□□□□□ -0.89
USP11-211ENST00000489111 GTF2H4Q92759 462 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 SERINC2Q96SA4 455 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 CGREF1Q99674 301 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 DPYSL5Q9BPU6 564 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 BHLHE41Q9C0J9 482 aaPredicted RBP9.52□□□□□ -0.89
USP11-211ENST00000489111 AICDAQ9GZX7 198 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 CHRNA10Q9GZZ6 450 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 FAM60AQ9NP50 221 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 PHF11Q9UIL8 331 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 MAN2B2Q9Y2E5 1009 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 PCDHGB2Q9Y5G2 931 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 U3KQA8 63 aa9.52□□□□□ -0.89
USP11-211ENST00000489111 VCANP13611 3396 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 PRSS51A0A1B0GVH4 220 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 LNP1A1A4G5 178 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 EME2A4GXA9 379 aaPredicted RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 GABRR3A8MPY1 467 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 PDPK1O15530 556 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 FLRT2O43155 660 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 SH3BP5O60239 455 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 STAMBPO95630 424 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 CPNE6O95741 557 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 NR2F6P10588 404 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms