RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PTCHD1Q96NR3 888 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 QRFPRQ96P65 431 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 EFCAB11Q9BUY7 163 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 ZGRF1Q86YA3 2104 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 ICE1Q9Y2F5 2266 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 ANKDD1BA6NHY2 528 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 KIF2AO00139 706 aaPredicted RBP23.47■■□□□ 1.35
HMGN1-217ENST00000489072 PRMT3O60678 531 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 MAOAP21397 527 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 ACTN3Q08043 901 aaPredicted RBP23.47■■□□□ 1.35
HMGN1-217ENST00000489072 CHIT1Q13231 466 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 RUNX2Q13950 521 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 E2F2Q14209 437 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 EXT1Q16394 746 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 FCRLBQ6BAA4 426 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 H3F3CQ6NXT2 135 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 CCDC91Q7Z6B0 441 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 M1APQ8TC57 530 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 MAGEB10Q96LZ2 347 aaPredicted RBP23.47■■□□□ 1.35
HMGN1-217ENST00000489072 GPR78Q96P69 363 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 LPAR4Q99677 370 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 RNF32Q9H0A6 362 aa23.47■■□□□ 1.35
HMGN1-217ENST00000489072 A0A096LPK6 155 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 IGKV3D-11A0A0A0MRZ8 115 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 A8MUI8 341 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 CASP2P42575 452 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 SERPINB8P50452 374 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 IRF8Q02556 426 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 ZNF33BQ06732 778 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 TBCCQ15814 346 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 FAM83EQ2M2I3 478 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 FHL5Q5TD97 284 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 ABHD17BQ5VST6 288 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 RHEBL1Q8TAI7 183 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 GRHL3Q8TE85 626 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 SLC44A1Q8WWI5 657 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 FAR2Q96K12 515 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 NPAS2Q99743 824 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 TSPYL1Q9H0U9 437 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 KCNK13Q9HB14 408 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 MMP25Q9NPA2 562 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 NECTIN3Q9NQS3 549 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 STMN3Q9NZ72 180 aa23.46■■□□□ 1.35
HMGN1-217ENST00000489072 K7EPI3 171 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 PSMD12O00232 456 aaPredicted RBP23.45■■□□□ 1.34
HMGN1-217ENST00000489072 SEMA7AO75326 666 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 TYK2P29597 1187 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 PLA2G16P53816 162 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 SLC26A5P58743 744 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 LAPTM5Q13571 262 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 RPUSD3Q6P087 351 aaKnown RBP23.45■■□□□ 1.34
HMGN1-217ENST00000489072 OR2L5Q8NG80 312 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 KIF18AQ8NI77 898 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 REXO4Q9GZR2 422 aaKnown RBP23.45■■□□□ 1.34
HMGN1-217ENST00000489072 PRDM9Q9NQV7 894 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 AGPAT4Q9NRZ5 378 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 OPTCQ9UBM4 332 aa23.45■■□□□ 1.34
HMGN1-217ENST00000489072 TRAV17A0A0B4J275 112 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 TCRBV16S1A1N1A0A5B0 115 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 KLHL2O95198 593 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 ACAP2Q15057 778 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 PAGE2BQ5JRK9 111 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 ACER2Q5QJU3 275 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 ABHD17CQ6PCB6 329 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 CRLF3Q8IUI8 442 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 CYP4X1Q8N118 509 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 PRR7Q8TB68 274 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 F2RL3Q96RI0 385 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 PAFAH2Q99487 392 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 NPLQ9BXD5 320 aaPredicted RBP23.44■■□□□ 1.34
HMGN1-217ENST00000489072 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.44■■□□□ 1.34
HMGN1-217ENST00000489072 TEKT2Q9UIF3 430 aa23.44■■□□□ 1.34
HMGN1-217ENST00000489072 OR5H15A6NDH6 313 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 ANKUB1A6NFN9 424 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 LRRC14BA6NHZ5 514 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 SYCE1LA8MT33 242 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 E2F3O00716 465 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 MAN1A2O60476 641 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 AGFG2O95081 481 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 MSH2P43246 934 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 MAGEA12P43365 314 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 HNRNPFP52597 415 aaKnown RBP23.43■■□□□ 1.34
HMGN1-217ENST00000489072 PCDH1Q08174 1060 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 SETDB1Q15047 1291 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 HIST2H2ACQ16777 129 aaPredicted RBP23.43■■□□□ 1.34
HMGN1-217ENST00000489072 HIST2H2AA3Q6FI13 130 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 TRIM40Q6P9F5 258 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 BEST3Q8N1M1 668 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 PLD6Q8N2A8 252 aaKnown RBP23.43■■□□□ 1.34
HMGN1-217ENST00000489072 TMEM52Q8NDY8 209 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 UHMK1Q8TAS1 419 aaKnown RBP23.43■■□□□ 1.34
HMGN1-217ENST00000489072 FAR1Q8WVX9 515 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 ISL2Q96A47 359 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 ZNF354BQ96LW1 612 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 TAAR6Q96RI8 345 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 VPS11Q9H270 941 aa23.43■■□□□ 1.34
HMGN1-217ENST00000489072 DOPEY1Q5JWR5 2465 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 CCDC189A1A4V9 331 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 CYSRT1A8MQ03 144 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 B3GALT2O43825 422 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms