RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TCEANCQ8N8B7 351 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 ARL14EPQ8N8R7 260 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 TSPAN18Q96SJ8 248 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 YME1L1Q96TA2 773 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 WFDC6Q9BQY6 131 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 DOHHQ9BU89 302 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 C11orf54Q9H0W9 315 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 TRPS1Q9UHF7 1281 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 LOC285556D6RIA3 1793 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 F5P12259 2224 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 A0A1B0GVM2 712 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 SCN2BO60939 215 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TSPAN19P0C672 248 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 PSKH1P11801 424 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TLE2Q04725 743 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 VEPH1Q14D04 833 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 CEP78Q5JTW2 689 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TMPRSS11BQ86T26 416 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 LACC1Q8IV20 430 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 NXPE1Q8N323 547 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 RAET1EQ8TD07 263 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 ASB15Q8WXK1 588 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 CEP295NLQ96MC4 621 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 ZDHHC6Q9H6R6 413 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 GPATCH2Q9NW75 528 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TVP23BQ9NYZ1 205 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 VPS29Q9UBQ0 182 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TEKT2Q9UIF3 430 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 GPR52Q9Y2T5 361 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 PCDHGA2Q9Y5H1 932 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 PLXNB2O15031 1838 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TRBV4-1A0A0J9YWV2 114 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 ERVH48-1M5A8F1 160 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 OR10H3O60404 316 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TNFRSF21O75509 655 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 SLITRK5O94991 958 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 AKR1A1P14550 325 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 ALDH9A1P49189 494 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 RAB8AP61006 207 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 RPS13P62277 151 aaKnown RBP11.88□□□□□ -0.51
HSPG2-211ENST00000486901 ZNF79Q15937 498 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 HECTD3Q5T447 861 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TYW3Q6IPR3 259 aaKnown RBP11.88□□□□□ -0.51
HSPG2-211ENST00000486901 SDE2Q6IQ49 451 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 SERPINA11Q86U17 422 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TIGD4Q8IY51 512 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 KIAA1958Q8N8K9 716 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 ZNF557Q8N988 423 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-211ENST00000486901 ART5Q96L15 291 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 SLC35A5Q9BS91 424 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 IL20RAQ9UHF4 553 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 A0A1W2PQL4 384 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-211ENST00000486901 GRXCR2A6NFK2 248 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 TMEM229AB2RXF0 380 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 CCNB2O95067 398 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 GADD45GO95257 159 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 PRPS2P11908 318 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 CHMP24386 653 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 APEX1P27695 318 aaKnown RBP11.88□□□□□ -0.51
HSPG2-211ENST00000486901 MRPL19P49406 292 aaKnown RBP11.88□□□□□ -0.51
HSPG2-211ENST00000486901 RUNX1T1Q06455 604 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 IQCCQ4KMZ1 466 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 USP50Q70EL3 339 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-211ENST00000486901 C1GALT1C1Q96EU7 318 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 UCKL1Q9NWZ5 548 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 PCDHB11Q9Y5F2 797 aa11.88□□□□□ -0.51
HSPG2-211ENST00000486901 ZNF623O75123 536 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 IGLV3-27P01718 113 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 PRPS1L1P21108 318 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 SCARB2Q14108 478 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 TTLL9Q3SXZ7 439 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 PDZK1Q5T2W1 519 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 C11orf96Q7Z7L8 435 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 HJURPQ8NCD3 748 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 C11orf65Q8NCR3 313 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 LINC01599Q8WXQ3 324 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 HECAQ9UBI9 543 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 CLEC4AQ9UMR7 237 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 CCDC182A6NF36 153 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 FABP12A6NFH5 140 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 WASHC1A8K0Z3 465 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 RTCAO00442 366 aaKnown RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 GPX2P18283 190 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 SLC11A1P49279 550 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 PRKCDQ05655 676 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 ADGRF1Q5T601 910 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 WASH2PQ6VEQ5 465 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 CCDC190Q86UF4 302 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 ZNF740Q8NDX6 193 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 SNAPC3Q92966 411 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 CMTM7Q96FZ5 175 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 SIGLEC11Q96RL6 698 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 MOV10Q9HCE1 1003 aaKnown RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 HHATLQ9HCP6 504 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 DYRK4Q9NR20 520 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 DNAJC11Q9NVH1 559 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 FNIP2Q9P278 1114 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 NLKQ9UBE8 527 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 MAN2B2Q9Y2E5 1009 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms