RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 CHPT1Q8WUD6 406 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PNPLA2Q96AD5 504 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZNF558Q96NG5 402 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CD180Q99467 661 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 TRMT61BQ9BVS5 477 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 SLC25A51Q9H1U9 297 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZNF701Q9NV72 531 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 ARMC1Q9NVT9 282 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZNF223Q9UK11 482 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 STUB1Q9UNE7 303 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 DERAQ9Y315 318 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZFP37Q9Y6Q3 630 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 ATRNL1Q5VV63 1379 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ENPP3O14638 875 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 TLR5O60602 858 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CHRNA1P02708 482 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 RHOP08100 348 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 MRPL3P09001 348 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 CD48P09326 243 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 AKR1C4P17516 323 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 AMY2BP19961 511 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 SLC6A6P31641 620 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PTGER3P43115 390 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PLA2G16P53816 162 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 C1QTNF8P60827 252 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ST3GAL4Q11206 333 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 TARBP2Q15633 366 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 MYLK3Q32MK0 819 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 NOMO2Q5JPE7 1267 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 SHQ1Q6PI26 577 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 NATD1Q8N6N6 113 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 NEIL3Q8TAT5 605 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CNIH3Q8TBE1 160 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 LPPQ93052 612 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 SECISBP2Q96T21 854 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 WRAP53Q9BUR4 548 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 PPA2Q9H2U2 334 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 FZD10Q9ULW2 581 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 NOX1Q9Y5S8 564 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 BCAS2O75934 225 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 CDK14O94921 469 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 MAOAP21397 527 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 EXOC3L2Q2M3D2 409 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 LIPKQ5VXJ0 399 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 TMEM198Q66K66 360 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 EPGNQ6UW88 154 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ENDOVQ8N8Q3 282 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 CPT1CQ8TCG5 803 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 DDX1Q92499 740 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZUFSPQ96AP4 578 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 DGAT2Q96PD7 388 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 MEAF6Q9HAF1 191 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PRMT8Q9NR22 394 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 NLGN3Q9NZ94 848 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 EBF1Q9UH73 591 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZDHHC2Q9UIJ5 367 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZFR2Q9UPR6 939 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 MGAT4BQ9UQ53 548 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 SHANK3Q9BYB0 1731 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 A0A1W2PQ67 120 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 RHPN2P1A8MT19 583 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 RASAL1O95294 804 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 FGF19O95750 216 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PTPRAP18433 802 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CDKN1CP49918 316 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 SMAD3P84022 425 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 PPIGQ13427 754 aaKnown RBP eCLIP8.48□□□□□ -1.052e-6■■□□□ 14.5
GABRE-209ENST00000486255 IKBKEQ14164 716 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PPA1Q15181 289 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 NTRK2Q16620 822 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ARSJQ5FYB0 599 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 WDR45BQ5MNZ6 344 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 MEDAGQ5VYS4 303 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 TMEM220Q6QAJ8 160 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 NDRG1Q92597 394 aaKnown RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 ESAMQ96AP7 390 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 NELL2Q99435 816 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 B3GNT5Q9BYG0 378 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 RETREG1Q9H6L5 497 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 HMX3A6NHT5 357 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 RAD51DO75771 328 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 DIRAS1O95057 198 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 GLUD1P00367 558 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 CKMT1AP12532 417 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 RHOQP17081 205 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 GSK3BP49841 420 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 CCR8P51685 355 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 PRKXP51817 358 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 PSRC1Q6PGN9 363 aaPredicted RBP8.47□□□□□ -1.05
GABRE-209ENST00000486255 BORAQ6PGQ7 559 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 MON1AQ86VX9 555 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 OR13C3Q8NGS6 347 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 LCN9Q8WX39 176 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 OR52B2Q96RD2 323 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 VRK1Q99986 396 aaPredicted RBP8.47□□□□□ -1.05
GABRE-209ENST00000486255 KATNBL1Q9H079 304 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 ADAMTS10Q9H324 1103 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 ZBTB26Q9HCK0 441 aa8.47□□□□□ -1.05
GABRE-209ENST00000486255 A0A0U1RQK1 487 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms