RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 GDF5P43026 501 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 RPL21P46778 160 aaKnown RBP18.87■□□□□ 0.61
ACTB-212ENST00000484841 CLCN2P51788 898 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 HYAL2Q12891 473 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 SLC13A2Q13183 592 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 SLBPQ14493 270 aaKnown RBP eCLIP18.87■□□□□ 0.61
ACTB-212ENST00000484841 SPPL2CQ8IUH8 684 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.87■□□□□ 0.612e-7■■□□□ 14.5
ACTB-212ENST00000484841 ADAMTS18Q8TE60 1221 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 CREB3L4Q8TEY5 395 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 ANKRD49Q8WVL7 239 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 RHBDF1Q96CC6 855 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 SMIM10Q96HG1 83 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 SEC16BQ96JE7 1060 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 FRMD6Q96NE9 622 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 CCDC77Q9BR77 488 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 NPLQ9BXD5 320 aaPredicted RBP18.87■□□□□ 0.61
ACTB-212ENST00000484841 PITHD1Q9GZP4 211 aaPredicted RBP18.87■□□□□ 0.61
ACTB-212ENST00000484841 DERL2Q9GZP9 239 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 COPS7BQ9H9Q2 264 aaPredicted RBP18.87■□□□□ 0.61
ACTB-212ENST00000484841 NECTIN3Q9NQS3 549 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 PRTFDC1Q9NRG1 225 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 GPRC5BQ9NZH0 403 aa18.87■□□□□ 0.61
ACTB-212ENST00000484841 ASNA1O43681 348 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 MYO1DO94832 1006 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 ZNF24P17028 368 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 MLF1P58340 268 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 TGM3Q08188 693 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 RCN2Q14257 317 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 TGFBIQ15582 683 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 C3AR1Q16581 482 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 TRIM40Q6P9F5 258 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 BNC2Q6ZN30 1099 aaPredicted RBP18.86■□□□□ 0.61
ACTB-212ENST00000484841 SLCO4C1Q6ZQN7 724 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 GPSM1Q86YR5 675 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 CEP97Q8IW35 865 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 EID3Q8N140 333 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 GHDCQ8N2G8 530 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 TMEM156Q8N614 296 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 SNX31Q8N9S9 440 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 NT5DC2Q9H857 520 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 SAYSD1Q9NPB0 183 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 PNO1Q9NRX1 252 aaKnown RBP18.86■□□□□ 0.61
ACTB-212ENST00000484841 TINAGQ9UJW2 476 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 FBXW2Q9UKT8 454 aa18.86■□□□□ 0.61
ACTB-212ENST00000484841 KLF13Q9Y2Y9 288 aaPredicted RBP18.86■□□□□ 0.61
ACTB-212ENST00000484841 A0A0G2JN53 185 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 TRBV11-1A0A0K0K1C0 115 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 KLRC4-KLRK1H3BQV0 150 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 NME2P1O60361 137 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 CCDC166P0CW27 439 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 STMN1P16949 149 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 NME2P22392 152 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 HTR1EP28566 365 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 TNFRSF8P28908 595 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 SLC6A12P48065 614 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 HLCSP50747 726 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 ATP6V0D1P61421 351 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 HIST2H2ACQ16777 129 aaPredicted RBP18.85■□□□□ 0.61
ACTB-212ENST00000484841 HIST2H2AA3Q6FI13 130 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 MAATS1Q7Z4T9 603 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 KLHDC8AQ8IYD2 350 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 POGLUT1Q8NBL1 392 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 B3GNT7Q8NFL0 401 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 VMP1Q96GC9 406 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 PDLIM2Q96JY6 352 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 UNKQ9C0B0 810 aaKnown RBP18.85■□□□□ 0.61
ACTB-212ENST00000484841 DPH5Q9H2P9 285 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 DNAJC11Q9NVH1 559 aa18.85■□□□□ 0.61
ACTB-212ENST00000484841 IGKV3D-11A0A0A0MRZ8 115 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 CTAGE15A4D2H0 777 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 LRIT2A6NDA9 550 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 SYNDIG1LA6NDD5 238 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 FAM187AA6NFU0 413 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 EIF3HO15372 352 aaKnown RBP eCLIP18.84■□□□□ 0.61
ACTB-212ENST00000484841 CLEC3AO75596 197 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 COX6B1P14854 86 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 SSTR1P30872 391 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 PLA2G16P53816 162 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 HSD17B7P56937 341 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 RAB38P57729 211 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 C18orf21Q32NC0 220 aaPredicted RBP18.84■□□□□ 0.61
ACTB-212ENST00000484841 PAGE2BQ5JRK9 111 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 ZNF468Q5VIY5 522 aaPredicted RBP18.84■□□□□ 0.61
ACTB-212ENST00000484841 SULT1C3Q6IMI6 304 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 CTAGE6Q86UF2 777 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 MCEMP1Q8IX19 187 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 MS4A6EQ96DS6 147 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 CPNE1Q99829 537 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 REXO4Q9GZR2 422 aaKnown RBP18.84■□□□□ 0.61
ACTB-212ENST00000484841 CAB39LQ9H9S4 337 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 CD274Q9NZQ7 290 aa18.84■□□□□ 0.61
ACTB-212ENST00000484841 MTO1Q9Y2Z2 717 aaKnown RBP18.84■□□□□ 0.61
ACTB-212ENST00000484841 PRRG2O14669 202 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 TRHRP34981 398 aaPredicted RBP18.83■□□□□ 0.6
ACTB-212ENST00000484841 LAPTM5Q13571 262 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 BMPR2Q13873 1038 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 RUNX2Q13950 521 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 TERF2Q15554 542 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 XKR6Q5GH73 641 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms