RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 DNAJC22Q8N4W6 341 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 ARL10Q8N8L6 244 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 OR2T12Q8NG77 320 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 NCOA7Q8NI08 942 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 FGFBP3Q8TAT2 258 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 MGARPQ8TDB4 240 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 SEPT1Q8WYJ6 367 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 TMEM190Q8WZ59 177 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 CCDC47Q96A33 483 aaKnown RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 FAM71F1Q96KD3 344 aaPredicted RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 GUCD1Q96NT3 240 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 THUMPD2Q9BTF0 503 aaKnown RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 SLC2A11Q9BYW1 496 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 MTMR12Q9C0I1 747 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 SLC5A7Q9GZV3 580 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 LSG1Q9H089 658 aaKnown RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 ZMYND12Q9H0C1 365 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 PANK3Q9H999 370 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 LMAN1LQ9HAT1 526 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 TRPV4Q9HBA0 871 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 DNAJC4Q9NNZ3 241 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 CHST11Q9NPF2 352 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 PDRG1Q9NUG6 133 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 MIS18AQ9NYP9 233 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 PKD2L2Q9NZM6 624 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 TRPC4Q9UBN4 977 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 GMEB2Q9UKD1 530 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 KNSTRNQ9Y448 316 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 MAP3K15Q6ZN16 1313 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 COL2A1P02458 1487 aaPredicted RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 A0A0C4DFX4 3053 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 A0A0U1RQG5 324 aaPredicted RBP3.32□□□□□ -1.88
GTF3A-207ENST00000482655 C13orf42A0A1B0GVH6 325 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 A0A1W2PRV1 198 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 ERVV-1B6SEH8 477 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 NR5A2O00482 541 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 ST8SIA3O43173 380 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 SELENOFO60613 162 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 PNPP00491 289 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 TSHBP01222 138 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 THEGLP0DJG4 465 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 EEF2P13639 858 aaKnown RBP3.32□□□□□ -1.88
GTF3A-207ENST00000482655 CDH3P22223 829 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 CCND3P30281 292 aaPredicted RBP3.32□□□□□ -1.88
GTF3A-207ENST00000482655 TIA1P31483 386 aaKnown RBP eCLIP3.32□□□□□ -1.88
GTF3A-207ENST00000482655 GSDMDP57764 484 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 ARF5P84085 180 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 CACNG1Q06432 222 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 ZNF415Q09FC8 603 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 ITGA9Q13797 1035 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 NONOQ15233 471 aaKnown RBP eCLIP3.32□□□□□ -1.88
GTF3A-207ENST00000482655 KRT71Q3SY84 523 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 ZFP69Q49AA0 526 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 SH2D5Q6ZV89 423 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 MCM10Q7L590 875 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 KRTAP7-1Q8IUC3 87 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 MMD2Q8IY49 270 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 TTC5Q8N0Z6 440 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 CCDC63Q8NA47 563 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 UXS1Q8NBZ7 420 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 TRIM58Q8NG06 486 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 ATP6V0A1Q93050 837 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 TSACCQ96A04 125 aaPredicted RBP3.32□□□□□ -1.88
GTF3A-207ENST00000482655 PYCR2Q96C36 320 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 DCPSQ96C86 337 aaKnown RBP3.32□□□□□ -1.88
GTF3A-207ENST00000482655 ART5Q96L15 291 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 KLHL5Q96PQ7 755 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 TEX13AQ9BXU3 409 aaPredicted RBP3.32□□□□□ -1.88
GTF3A-207ENST00000482655 FGF21Q9NSA1 209 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 WDR83OSQ9Y284 106 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 DLG5Q8TDM6 1919 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 MUC3AQ02505 3323 aa3.32□□□□□ -1.88
GTF3A-207ENST00000482655 CASTOR2A6NHX0 329 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 C2orf81A6NN90 581 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 EXTL3O43909 919 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 RTN2O75298 545 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 ATP6AP2O75787 350 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 MOCS2O96007 188 aaPredicted RBP3.31□□□□□ -1.88
GTF3A-207ENST00000482655 GH1P01241 217 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 CD48P09326 243 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 LBPP18428 481 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 PTMSP20962 102 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 CSTF2P33240 577 aaKnown RBP eCLIP3.31□□□□□ -1.88
GTF3A-207ENST00000482655 CTNNB1P35222 781 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 CETN2P41208 172 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 FRKP42685 505 aaPredicted RBP3.31□□□□□ -1.88
GTF3A-207ENST00000482655 CDX1P47902 265 aaPredicted RBP3.31□□□□□ -1.88
GTF3A-207ENST00000482655 KCNJ1P48048 391 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 VAMP7P51809 220 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 FKBP1BP68106 108 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 KCNJ10P78508 379 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 FOLH1Q04609 750 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 LGALS3BPQ08380 585 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 SLC1A5Q15758 541 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 ITPRIPL2Q3MIP1 535 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 IQCCQ4KMZ1 466 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 PHLDA2Q53GA4 152 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 OR4A47Q6IF82 309 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 CYB5D1Q6P9G0 228 aa3.31□□□□□ -1.88
GTF3A-207ENST00000482655 KCTD9Q7L273 389 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms