RNA–Protein interactions for RNA: ENST00000482630.6

VEGFA-213, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-213ENST00000482630 HIST2H2AA3Q6FI13 130 aa23.66■■□□□ 1.38
VEGFA-213ENST00000482630 TRIM40Q6P9F5 258 aa23.66■■□□□ 1.38
VEGFA-213ENST00000482630 ISCA2Q86U28 154 aa23.66■■□□□ 1.38
VEGFA-213ENST00000482630 CRLF3Q8IUI8 442 aa23.66■■□□□ 1.38
VEGFA-213ENST00000482630 REXO4Q9GZR2 422 aaKnown RBP23.66■■□□□ 1.38
VEGFA-213ENST00000482630 MTRF1LQ9UGC7 380 aaKnown RBP23.66■■□□□ 1.38
VEGFA-213ENST00000482630 ACOT9Q9Y305 439 aa23.66■■□□□ 1.38
VEGFA-213ENST00000482630 MMACHCQ9Y4U1 282 aa23.66■■□□□ 1.38
VEGFA-213ENST00000482630 LRRK2Q5S007 2527 aa23.66■■□□□ 1.38
VEGFA-213ENST00000482630 PRRC2CQ9Y520 2896 aaKnown RBP23.66■■□□□ 1.38
VEGFA-213ENST00000482630 A0A087X1B8 175 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 SUPT3HB4E1H0 165 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 FAM227AF5H4B4 570 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 KERAO60938 352 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 SUPT3HO75486 399 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 RASAL1O95294 804 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 MAOAP21397 527 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 GMPRP36959 345 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 KCNC1P48547 511 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 IRF8Q02556 426 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 DLG1Q12959 904 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 OR2L5Q8NG80 312 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 ADAMTS18Q8TE60 1221 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 TAAR6Q96RI8 345 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 ATOH8Q96SQ7 321 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 IGSF5Q9NSI5 407 aa23.65■■□□□ 1.38
VEGFA-213ENST00000482630 PLEKHB1Q9UF11 243 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-213ENST00000482630 RP1L1Q8IWN7 2480 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-213ENST00000482630 IGKV3D-11A0A0A0MRZ8 115 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 A0A0G2JN53 185 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 TCRBV16S1A1N1A0A5B0 115 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 SAGE2PA6NJ88 616 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 B3GALT2O43825 422 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 PRAMEF4O60810 478 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 CRYABP02511 175 aaKnown RBP23.64■■□□□ 1.37
VEGFA-213ENST00000482630 RNF224P0DH78 156 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 TGM3Q08188 693 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 CHIT1Q13231 466 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 TBCCQ15814 346 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 ADPRMQ3LIE5 342 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 PRAMEF9Q5VWM5 478 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 ZNF324BQ6AW86 544 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-213ENST00000482630 LGI4Q8N135 537 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 DNAJB8Q8NHS0 232 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 ELP5Q8TE02 316 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 NR4A3Q92570 626 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 ZNF592Q92610 1267 aa23.64■■□□□ 1.37
VEGFA-213ENST00000482630 MRRFQ96E11 262 aaKnown RBP23.64■■□□□ 1.37
VEGFA-213ENST00000482630 UTP23Q9BRU9 249 aaKnown RBP23.64■■□□□ 1.37
VEGFA-213ENST00000482630 COPS7BQ9H9Q2 264 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-213ENST00000482630 ZNF490Q9ULM2 529 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-213ENST00000482630 CCDC189A1A4V9 331 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 SYCE1LA8MT33 242 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 UBXN8O00124 270 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 LDLRP01130 860 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 PLA2G16P53816 162 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 RAB38P57729 211 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 TUBA3CQ13748 450 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 RUNX2Q13950 521 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 UAP1Q16222 522 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-213ENST00000482630 FAM83EQ2M2I3 478 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 ZNF766Q5HY98 468 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 MROH9Q5TGP6 573 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 TUBA3EQ6PEY2 450 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 VN1R5Q7Z5H4 357 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 MMGT1Q8N4V1 131 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 MNS1Q8NEH6 495 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 UBTD2Q8WUN7 234 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 UBE2E3Q969T4 207 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 NXNL1Q96CM4 212 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 SCN2AQ99250 2005 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 TSPYL1Q9H0U9 437 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 PRM3Q9NNZ6 103 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 NECTIN3Q9NQS3 549 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 OPTCQ9UBM4 332 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 OSGIN2Q9Y236 505 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 MRPS33Q9Y291 106 aaKnown RBP23.63■■□□□ 1.37
VEGFA-213ENST00000482630 PCDHGB6Q9Y5F9 930 aa23.63■■□□□ 1.37
VEGFA-213ENST00000482630 WIPF3A6NGB9 483 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 K7EPI3 171 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 CLDN4O14493 209 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 CDK2AP1O14519 115 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 EPORP19235 508 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 CD22P20273 847 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 CASP2P42575 452 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 BMPR2Q13873 1038 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 RCN2Q14257 317 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 C4orf17Q53FE4 359 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 HORMAD2Q8N7B1 307 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 RHEBL1Q8TAI7 183 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 QRFPRQ96P65 431 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 SERINC2Q96SA4 455 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 NPAS2Q99743 824 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 NINJ2Q9NZG7 142 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 ASB1Q9Y576 335 aa23.62■■□□□ 1.37
VEGFA-213ENST00000482630 USP9XQ93008 2570 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-213ENST00000482630 GABRR3A8MPY1 467 aa23.61■■□□□ 1.37
VEGFA-213ENST00000482630 TBX6O95947 436 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-213ENST00000482630 C2P06681 752 aa23.61■■□□□ 1.37
VEGFA-213ENST00000482630 TDGF1P3P51864 188 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms