RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ZXDCQ2QGD7 858 aaPredicted RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 ADPRMQ3LIE5 342 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 KBTBD12Q3ZCT8 623 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 XKR6Q5GH73 641 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 TOR1AIP1Q5JTV8 583 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 ZNF324BQ6AW86 544 aaPredicted RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 GFRALQ6UXV0 394 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 RPTNQ6XPR3 784 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 SYT10Q6XYQ8 523 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 CHSY3Q70JA7 882 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 RPS19BP1Q86WX3 136 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 GPALPP1Q8IXQ4 340 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCM2-213ENST00000480658 BEST3Q8N1M1 668 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 TMEM132CQ8N3T6 1108 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 PPM1NQ8N819 430 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 SNX31Q8N9S9 440 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 B3GNT7Q8NFL0 401 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 FBXO25Q8TCJ0 367 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 ELP5Q8TE02 316 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 CREB3L4Q8TEY5 395 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 THAP3Q8WTV1 239 aaPredicted RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 UBTD2Q8WUN7 234 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 DAZLQ92904 295 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 MS4A6EQ96DS6 147 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 SMIM10Q96HG1 83 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 CD244Q9BZW8 370 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 RHBGQ9H310 441 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 LYRM4Q9HD34 91 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 PRM3Q9NNZ6 103 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 MS4A12Q9NXJ0 267 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 OPTCQ9UBM4 332 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 SEC14L3Q9UDX4 400 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 ERRFI1Q9UJM3 462 aaPredicted RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 PTBP2Q9UKA9 531 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 NTNG1Q9Y2I2 539 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 MTO1Q9Y2Z2 717 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 ACOT9Q9Y305 439 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 TNPO3Q9Y5L0 923 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 MDC1Q14676 2089 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 CPAMD8Q8IZJ3 1885 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 IGKV3D-11A0A0A0MRZ8 115 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 GABRR3A8MPY1 467 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 K7EPI3 171 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 B4GALT2O60909 372 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 TFEBP19484 476 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 CNTFP26441 200 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 RAB38P57729 211 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 BTN3A2P78410 334 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 OC90Q02509 493 aaPredicted RBP10.74□□□□□ -0.69
CCM2-213ENST00000480658 PCDH1Q08174 1060 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 SLC13A2Q13183 592 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 TUBA3CQ13748 450 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 SERTAD2Q14140 314 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 E2F2Q14209 437 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 ACAP2Q15057 778 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 OR1C1Q15619 314 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 GLE1Q53GS7 698 aaKnown RBP10.74□□□□□ -0.69
CCM2-213ENST00000480658 MED27Q6P2C8 311 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 TUBA3EQ6PEY2 450 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 BNC2Q6ZN30 1099 aaPredicted RBP10.74□□□□□ -0.69
CCM2-213ENST00000480658 CRLF3Q8IUI8 442 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 RELL1Q8IUW5 271 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 TMEM151BQ8IW70 566 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 CA13Q8N1Q1 262 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 ARMC10Q8N2F6 343 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 CATSPER1Q8NEC5 780 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 OR5T3Q8NGG3 340 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 MOCOSQ96EN8 888 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 VMP1Q96GC9 406 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 SCMH1Q96GD3 660 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 MAGED4Q96JG8 741 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 TBCDQ9BTW9 1192 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 RBCK1Q9BYM8 510 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 DEFB126Q9BYW3 111 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 ADAP2Q9NPF8 381 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 PLA2G3Q9NZ20 509 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 LRFN1Q9P244 771 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 PPIEQ9UNP9 301 aaKnown RBP10.74□□□□□ -0.69
CCM2-213ENST00000480658 OSGIN2Q9Y236 505 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 KLF13Q9Y2Y9 288 aaPredicted RBP10.74□□□□□ -0.69
CCM2-213ENST00000480658 TSC22D4Q9Y3Q8 395 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 ANGPTL3Q9Y5C1 460 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 SHANK1Q9Y566 2161 aa10.74□□□□□ -0.69
CCM2-213ENST00000480658 IGHV3-20A0A0C4DH32 117 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 ASPDHA6ND91 283 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 SUPT3HB4E1H0 165 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 KLRC4-KLRK1H3BQV0 150 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 FANCGO15287 622 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 PHGDHO43175 533 aaKnown RBP10.73□□□□□ -0.69
CCM2-213ENST00000480658 LRRTM2O43300 516 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 CCNT2O60583 730 aaKnown RBP10.73□□□□□ -0.69
CCM2-213ENST00000480658 SUPT3HO75486 399 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 SLC35E2BP0CK96 405 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 COX7A2P14406 83 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 TRHRP34981 398 aaPredicted RBP10.73□□□□□ -0.69
CCM2-213ENST00000480658 HNF4AP41235 474 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 HSPA7P48741 367 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 SERPINB8P50452 374 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 TDGF1P3P51864 188 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms