RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TTMPQ5BVD1 217 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 RNF175Q8N4F7 328 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 OR51Q1Q8NH59 317 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 METTL6Q8TCB7 284 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 STT3BQ8TCJ2 826 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 NACC2Q96BF6 587 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 SERINC2Q96SA4 455 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 SERPINI1Q99574 410 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 EML4Q9HC35 981 aaKnown RBP18.68■□□□□ 0.58
LIME1-205ENST00000480139 PTRH2Q9Y3E5 179 aaKnown RBP18.68■□□□□ 0.58
LIME1-205ENST00000480139 LAMA5O15230 3695 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 ZZEF1O43149 2961 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 SERTM1A2A2V5 107 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 MANBAO00462 879 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 CYC1P08574 325 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 ZGLP1P0C6A0 271 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 HSD3B1P14060 373 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 HSD3B2P26439 372 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 HMOX2P30519 316 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 CCR10P46092 362 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 PLA2G16P53816 162 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 MTTPP55157 894 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 BTN3A2P78410 334 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 MAT1AQ00266 395 aaKnown RBP18.67■□□□□ 0.58
LIME1-205ENST00000480139 CSTF3Q12996 717 aaKnown RBP18.67■□□□□ 0.58
LIME1-205ENST00000480139 UGT8Q16880 541 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 MED25Q71SY5 747 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 UBE3DQ7Z6J8 389 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 ZC3H7AQ8IWR0 971 aaKnown RBP18.67■□□□□ 0.58
LIME1-205ENST00000480139 SELENOMQ8WWX9 145 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 RGMAQ96B86 450 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 MIEF2Q96C03 454 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 OR1F2PQ96R84 312 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 OR51B5Q9H339 312 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 CPNE5Q9HCH3 593 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 PRDM7Q9NQW5 492 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 NKIRAS1Q9NYS0 192 aa18.67■□□□□ 0.58
LIME1-205ENST00000480139 CCDC88CQ9P219 2028 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 ZNF860A6NHJ4 632 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 PLPP1O14494 284 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 B3GALT2O43825 422 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 ULK1O75385 1050 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 SNUPNO95149 360 aaKnown RBP18.66■□□□□ 0.58
LIME1-205ENST00000480139 B3GALT4O96024 378 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 PDYNP01213 254 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 SERPINE1P05121 402 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 RAP1GDS1P52306 607 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 WDR4P57081 412 aaKnown RBP18.66■□□□□ 0.58
LIME1-205ENST00000480139 CDC20Q12834 499 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 SSPNQ14714 243 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 SYT16Q17RD7 645 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 HHATQ5VTY9 493 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 ZCCHC23Q6ZST2 131 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 CUZD1Q86UP6 607 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 GBP7Q8N8V2 638 aaPredicted RBP18.66■□□□□ 0.58
LIME1-205ENST00000480139 ANKRD42Q8N9B4 389 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 OR5T3Q8NGG3 340 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 ADAMTS17Q8TE56 1095 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 COPS7BQ9H9Q2 264 aaPredicted RBP18.66■□□□□ 0.58
LIME1-205ENST00000480139 PRM3Q9NNZ6 103 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 FARSBQ9NSD9 589 aaKnown RBP18.66■□□□□ 0.58
LIME1-205ENST00000480139 NMRK1Q9NWW6 199 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 HCN3Q9P1Z3 774 aa18.66■□□□□ 0.58
LIME1-205ENST00000480139 TMEM114B3SHH9 223 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 PCDH17O14917 1159 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 CHST10O43529 356 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 BMP10O95393 424 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 ETHE1O95571 254 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 IGHEP01854 428 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 CHRNGP07510 517 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 UMODP07911 640 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 FGF4P08620 206 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 UROSP10746 265 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 HIST1H1TP22492 207 aaPredicted RBP18.65■□□□□ 0.58
LIME1-205ENST00000480139 GRK2P25098 689 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 XCR1P46094 333 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 FOXA1P55317 472 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 CXADRP78310 365 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 KLC1Q07866 573 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 IL10RAQ13651 578 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 AP5B1Q2VPB7 878 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 VWA2Q5GFL6 755 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 ARL13AQ5H913 290 aaPredicted RBP18.65■□□□□ 0.58
LIME1-205ENST00000480139 TCHHL1Q5QJ38 904 aaPredicted RBP18.65■□□□□ 0.58
LIME1-205ENST00000480139 OR4C11Q6IEV9 310 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 RNF165Q6ZSG1 346 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 PPP1R14CQ8TAE6 165 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 ADAMTS18Q8TE60 1221 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 MTFMTQ96DP5 389 aaKnown RBP18.65■□□□□ 0.58
LIME1-205ENST00000480139 IP6K3Q96PC2 410 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 KCNA7Q96RP8 456 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 YIPF2Q9BWQ6 316 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 ZNF717Q9BY31 904 aaPredicted RBP18.65■□□□□ 0.58
LIME1-205ENST00000480139 PRORYQ9H606 182 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 SEMA3GQ9NS98 782 aa18.65■□□□□ 0.58
LIME1-205ENST00000480139 CFAP47Q6ZTR5 3102 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 A0A0G2JN53 185 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 AZIN1O14977 448 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 NKX2-8O15522 239 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 CRCPO75575 148 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms