RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 MMP11P24347 488 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 ETV4P43268 484 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 TSFMP43897 325 aaKnown RBP10.24□□□□□ -0.77
ATG4B-219ENST00000479941 XCR1P46094 333 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 RPS13P62277 151 aaKnown RBP10.24□□□□□ -0.77
ATG4B-219ENST00000479941 BTN3A2P78410 334 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 CUL3Q13618 768 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 ATP1A1-AS1Q5TC04 95 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 FAM69BQ5VUD6 431 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 KHDRBS2Q5VWX1 349 aaKnown RBP10.24□□□□□ -0.77
ATG4B-219ENST00000479941 LETMD1Q6P1Q0 360 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 GPRIN3Q6ZVF9 776 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 HDXQ7Z353 690 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 ZC3H7AQ8IWR0 971 aaKnown RBP10.24□□□□□ -0.77
ATG4B-219ENST00000479941 HOMEZQ8IX15 550 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 OR5T3Q8NGG3 340 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 METTL6Q8TCB7 284 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 CNDP1Q96KN2 507 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 F2RL3Q96RI0 385 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 SERINC2Q96SA4 455 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 TRMOQ9BU70 441 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 CRB3Q9BUF7 120 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 SLC29A3Q9BZD2 475 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 COPS7BQ9H9Q2 264 aaPredicted RBP10.24□□□□□ -0.77
ATG4B-219ENST00000479941 TMBIM4Q9HC24 238 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 ACSS2Q9NR19 701 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 HCN3Q9P1Z3 774 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 C3orf18Q9UK00 162 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 ZNF225Q9UK10 706 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 SCN3AQ9NY46 2000 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 IDSB3KWA1 339 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 ERVH48-1M5A8F1 160 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 FFAR3O14843 346 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 GPR42O15529 346 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 CHST10O43529 356 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 B3GALT2O43825 422 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 ZWINTO95229 277 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 B3GALT4O96024 378 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 KRT6AP02538 564 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 KRT6BP04259 564 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 HEXBP07686 556 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 BPGMP07738 259 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 FHP07954 510 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 JAK1P23458 1154 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 HMOX2P30519 316 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 ALDH3A1P30838 453 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 OTX2P32243 289 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 KRT6CP48668 564 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 NEK2P51955 445 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 EMP2P54851 167 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 MTTPP55157 894 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 FOXL2P58012 376 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 ZNF33BQ06732 778 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 RCN2Q14257 317 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 TBR1Q16650 682 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 AP5B1Q2VPB7 878 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 DEFB109BQ30KR1 87 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 BORAQ6PGQ7 559 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 SHISA6Q6ZSJ9 500 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 MED25Q71SY5 747 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 LAPTM4BQ86VI4 370 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 PRSS58Q8IYP2 241 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 CDYL2Q8N8U2 506 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 ADAMTS18Q8TE60 1221 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 AGAP11Q8TF27 550 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 SELENOMQ8WWX9 145 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 RGMAQ96B86 450 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 TBC1D20Q96BZ9 403 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 ZBTB9Q96C00 473 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 MTFMTQ96DP5 389 aaKnown RBP10.23□□□□□ -0.77
ATG4B-219ENST00000479941 PEX11GQ96HA9 241 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 QRFPRQ96P65 431 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 SERPINI1Q99574 410 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 GATA5Q9BWX5 397 aaPredicted RBP10.23□□□□□ -0.77
ATG4B-219ENST00000479941 OR51B5Q9H339 312 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 VIPAS39Q9H9C1 493 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 BRF2Q9HAW0 419 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 MID1IP1Q9NPA3 183 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 KCNK9Q9NPC2 374 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 PRDM7Q9NQW5 492 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 MAN2B2Q9Y2E5 1009 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 KALRNO60229 2985 aa10.23□□□□□ -0.77
ATG4B-219ENST00000479941 BOD1L1Q8NFC6 3051 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 A0A0G2JN53 185 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 AGPSO00116 658 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 PSMD12O00232 456 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-219ENST00000479941 PEX12O00623 359 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 NPHS1O60500 1241 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 SH3BGRLO75368 114 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 ULK1O75385 1050 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 SEMA3DO95025 777 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 SCELO95171 688 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 PDYNP01213 254 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 RNH1P13489 461 aaKnown RBP10.22□□□□□ -0.77
ATG4B-219ENST00000479941 HSD3B1P14060 373 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 HIST1H1TP22492 207 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-219ENST00000479941 HSD3B2P26439 372 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 SERPINB5P36952 375 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 SSR2P43308 183 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms