RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 JSRP1Q96MG2 331 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-208ENST00000478423 MUS81Q96NY9 551 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 KCNK13Q9HB14 408 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 HSFX1Q9UBD0 423 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 ERVK-11Q9UQG0 969 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 NME4O00746 187 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 COQ9O75208 318 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 FUT4P22083 530 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 GABRB3P28472 473 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 CSTF2P33240 577 aaKnown RBP eCLIP13.67□□□□□ -0.22
NPHP4-208ENST00000478423 FADDQ13158 208 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 PIGGQ5H8A4 983 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 HACD2Q6Y1H2 254 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 AMIGO1Q86WK6 493 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 TMEM126BQ8IUX1 230 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 OR7G3Q8NG95 312 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 KCNN1Q92952 543 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 TSACCQ96A04 125 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-208ENST00000478423 FARSBQ9NSD9 589 aaKnown RBP13.67□□□□□ -0.22
NPHP4-208ENST00000478423 GDE1Q9NZC3 331 aa13.67□□□□□ -0.22
NPHP4-208ENST00000478423 KLHL33A6NCF5 533 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 OR6C74A6NCV1 312 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 WASH3PC4AMC7 463 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 TLX2O43763 284 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 UQCRC2P22695 453 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ADRA1AP35348 466 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 KCNC1P48547 511 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 IL18Q14116 193 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 EGFLAMQ63HQ2 1017 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 LIPIQ6XZB0 460 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 NECTIN4Q96NY8 510 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 GALNT8Q9NY28 637 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 C2orf74A8MZ97 194 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 RPS17P08708 135 aaKnown RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 PRKAR1AP10644 381 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 MNDAP41218 407 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ABATP80404 500 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ZNF267Q14586 743 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ARHGAP40Q5TG30 622 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 KIAA1614Q5VZ46 1190 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 GAREM2Q75VX8 874 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ASPGQ86U10 573 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 CLECL1Q8IZS7 167 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 FBXL8Q96CD0 374 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 SLC25A36Q96CQ1 311 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 APIPQ96GX9 242 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 OR8D2Q9GZM6 311 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 TMEM138Q9NPI0 162 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 SNTG1Q9NSN8 517 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 NKIRAS2Q9NYR9 191 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ACSL6Q9UKU0 697 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 LAMP1P11279 417 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 GSTM4Q03013 218 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 RBBP4Q09028 425 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ZNF423Q2M1K9 1284 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 COQ5Q5HYK3 327 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 CATSPEREQ5SY80 951 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 C9orf43Q8TAL5 461 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 KLHL6Q8WZ60 621 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 FOXJ1Q92949 421 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 MAPKAP1Q9BPZ7 522 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 MS4A12Q9NXJ0 267 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 IRAK3Q9Y616 596 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 H3BQ06 376 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 PSIP1O75475 530 aaKnown RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 OR12D1P0DN82 309 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 SMSP52788 366 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 NRG3P56975 720 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ERVFC1P60507 584 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 NUP54Q7Z3B4 507 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 COMMD6Q7Z4G1 85 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 ATOH8Q96SQ7 321 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 GTPBP2Q9BX10 602 aaKnown RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 CPEB1Q9BZB8 566 aaKnown RBP13.66□□□□□ -0.22
NPHP4-208ENST00000478423 KCNN2Q9H2S1 579 aa13.66□□□□□ -0.22
NPHP4-208ENST00000478423 CDC123O75794 336 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 LINGO3P0C6S8 592 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 HRH2P25021 359 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 SDC2P34741 201 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 RPS26P62854 115 aaKnown RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 ADAM17P78536 824 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 MS4A2Q01362 244 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 PON2Q15165 354 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 PTPRRQ15256 657 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 ATP6AP1Q15904 470 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 C5orf22Q49AR2 442 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 RNASE12Q5GAN4 147 aaKnown RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 PHF19Q5T6S3 580 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 PARS2Q7L3T8 475 aaKnown RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 PGBD5Q8N414 524 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 LINC00471Q8N535 108 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 Q8N9G6 341 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 SMPDL3BQ92485 455 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 UFD1Q92890 307 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 EFHD2Q96C19 240 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 TSSK6Q9BXA6 273 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 ASCC3Q8N3C0 2202 aaKnown RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms