RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ACVR2AP27037 513 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TPP2P29144 1249 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TAS2R38P59533 333 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TRA2BP62995 288 aaKnown RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 RAPSNQ13702 412 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 NEDD8Q15843 81 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 C17orf64Q86WR6 236 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 OR4C15Q8NGM1 316 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 OR5AR1Q8NGP9 310 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 SMPDL3AQ92484 453 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 MSLNLQ96KJ4 702 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 NODALQ96S42 347 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 BARD1Q99728 777 aaKnown RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 MS4A8Q9BY19 250 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 RMI1Q9H9A7 625 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 CCNB1IP1Q9NPC3 277 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 PDP1Q9P0J1 537 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TPRKBQ9Y3C4 175 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 SNX5Q9Y5X3 404 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TBC1D3BA6NDS4 549 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 ARRDC5A6NEK1 342 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 PRR19A6NJB7 356 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 hCG_2039718K7EN88 272 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 B4GAT1O43505 415 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 C6orf47O95873 294 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 ITGA2P17301 1181 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 DDCP20711 480 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 C5AR1P21730 350 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 MATN1P21941 496 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 EMP3P54852 163 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TAS2R50P59544 299 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 DEPDC1Q5TB30 811 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 MLIPQ5VWP3 458 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 KHDRBS2Q5VWX1 349 aaKnown RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 PAGE2Q7Z2X7 111 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TSEN54Q7Z6J9 526 aaKnown RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TIMM29Q9BSF4 260 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 LHPPQ9H008 270 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 OR51B5Q9H339 312 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 U3KQV3 271 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 KAT7O95251 611 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 TBX6O95947 436 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-212ENST00000477970 EPHX1P07099 455 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 ARFIP1P53367 373 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 MVKQ03426 396 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 MLC1Q15049 377 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 WSCD2Q2TBF2 565 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 IFI44LQ53G44 452 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 LINC00299Q6ZSB3 139 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 NUDT18Q6ZVK8 323 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 SFTPA1Q8IWL2 248 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 TTC29Q8NA56 475 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-212ENST00000477970 LZICQ8WZA0 190 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 FKBP10Q96AY3 582 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 CHFRQ96EP1 664 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 KRT84Q9NSB2 600 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 ANGPTL1O95841 491 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 CCNA2P20248 432 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 LTBRP36941 435 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 MAGEA8P43361 318 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 CCR8P51685 355 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 SLC35A2P78381 396 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 SCARB2Q14108 478 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 PROX2Q3B8N5 592 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 KIAA1161Q6NSJ0 714 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 ANKRD13BQ86YJ7 626 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 IPCEF1Q8WWN9 437 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-212ENST00000477970 OR5P2Q8WZ92 322 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 HRASLS5Q96KN8 279 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 LIN28AQ9H9Z2 209 aaKnown RBP11.67□□□□□ -0.54
PTPRF-212ENST00000477970 PLGRKTQ9HBL7 147 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 PAK1IP1Q9NWT1 392 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-212ENST00000477970 NDUFAF4Q9P032 175 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 TAAR2Q9P1P5 351 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 SLC23A2Q9UGH3 650 aa11.67□□□□□ -0.54
PTPRF-212ENST00000477970 A0A1W2PPV9 198 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 A0A1W2PRB8 838 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 MITFO75030 526 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-212ENST00000477970 KLK1P06870 262 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 AGXTP21549 392 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 BSGP35613 385 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 HMGA2P52926 109 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 MAD2L1BPQ15013 274 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-212ENST00000477970 CST6Q15828 149 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 TANGO2Q6ICL3 276 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 CHST15Q7LFX5 561 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-212ENST00000477970 B3GNT8Q7Z7M8 397 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 FAM124AQ86V42 546 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 RAB42Q8N4Z0 105 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 OR10Q1Q8NGQ4 319 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 PSMA8Q8TAA3 256 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 A4GALTQ9NPC4 353 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 PSME2Q9UL46 239 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 TMEM98Q9Y2Y6 226 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 GMPPBQ9Y5P6 360 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 LYVE1Q9Y5Y7 322 aa11.66□□□□□ -0.54
PTPRF-212ENST00000477970 LAMA2P24043 3122 aaKnown RBP11.66□□□□□ -0.54
PTPRF-212ENST00000477970 ANKRD33BA6NCL7 494 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms