RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 LURAP1Q96LR2 239 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 TMEM209Q96SK2 561 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 ZPBPQ9BS86 351 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PRMT8Q9NR22 394 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 KRT84Q9NSB2 600 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 ERVW-1Q9UQF0 538 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PRG3Q9Y2Y8 225 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 SLC6A5Q9Y345 797 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 KLK4Q9Y5K2 254 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 CEP350Q5VT06 3117 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PTPRDP23468 1912 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 A0A1B0GV90 55 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 NBNO60934 754 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PRKRAO75569 313 aaKnown RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 SNAPC5O75971 98 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 MPC2O95563 127 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 MAPK1P28482 360 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 MAGEA3P43357 314 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 NRIP1P48552 1158 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 TGM4P49221 684 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 CXCR3P49682 368 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 TPI1P60174 286 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 ABATP80404 500 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 SLC3A1Q07837 685 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 FRG1Q14331 258 aaKnown RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PAFAH1B3Q15102 231 aaKnown RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 TIGD6Q17RP2 521 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 SLC39A12Q504Y0 691 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 SAXO2Q658L1 398 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 ZNF470Q6ECI4 717 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 VASNQ6EMK4 673 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 TRMT10BQ6PF06 316 aaKnown RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 BLOC1S3Q6QNY0 202 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 BHLHA9Q7RTU4 235 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 B3GNT8Q7Z7M8 397 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PROSER1Q86XN7 944 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 WDR36Q8NI36 951 aaKnown RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 EDEM1Q92611 657 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 NSMCE2Q96MF7 247 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 NELL2Q99435 816 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 MAGEB5Q9BZ81 275 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 RBFOX1Q9NWB1 397 aaKnown RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 TREM2Q9NZC2 230 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 CCDC167Q9P0B6 97 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 DNAJB9Q9UBS3 223 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 ZDHHC2Q9UIJ5 367 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 KCNK1O00180 336 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 UBDO15205 165 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 CRTAPO75718 401 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 APRTP07741 180 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 EFNA1P20827 205 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 LAP3P28838 519 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 MAP2K3P46734 347 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 TIMM50Q3ZCQ8 353 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 ARL13AQ5H913 290 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 IL31Q6EBC2 164 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 PGAP1Q75T13 922 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 ZER1Q7Z7L7 766 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 OR2T4Q8NH00 348 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 CEP76Q8TAP6 659 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 BTN2A2Q8WVV5 523 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 C19orf43Q9BQ61 176 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 CARS2Q9HA77 564 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 GLOD4Q9HC38 313 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 MARK1Q9P0L2 795 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 SAMHD1Q9Y3Z3 626 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 FAM74A7A6NL05 159 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 OR6C75A6NL08 312 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 BCKDKO14874 412 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 MFSD11O43934 449 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 B4GALT3O60512 393 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 HPGDSO60760 199 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 OR56A5P0C7T3 313 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 CKMT1AP12532 417 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 APEHP13798 732 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 ZNF8P17098 575 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 TPSB2P20231 275 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 RAB3BP20337 219 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 ACADLP28330 430 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 ACTR1AP61163 376 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 IL5RAQ01344 420 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 ELAVL2Q12926 359 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 ALKBH1Q13686 389 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 USP10Q14694 798 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 TPSAB1Q15661 275 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 TBCEQ15813 527 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 FAM74A3Q4VXF1 159 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 COQ5Q5HYK3 327 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 LCN1P1Q5VSP4 162 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 STEAP4Q687X5 459 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 BICRALQ6AI39 1079 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 LAYNQ6UX15 382 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 CHMP1BQ7LBR1 199 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 ZNF540Q8NDQ6 660 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 CLHC1Q8NHS4 586 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 GLYATL2Q8WU03 294 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 PYCR2Q96C36 320 aa12.18□□□□□ -0.46
RTFDC1-207ENST00000477573 DEFB118Q96PH6 123 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms