RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ECHDC2Q86YB7 292 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 GALNT13Q8IUC8 556 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 CBWD2Q8IUF1 395 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 CD302Q8IX05 232 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 URGCPQ8TCY9 931 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 ZNF473Q8WTR7 871 aaKnown RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 BADQ92934 168 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 CCDC127Q96BQ5 260 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 EEF2KMTQ96G04 330 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 ANKRD36BP1Q96IX9 119 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 LINC00479Q96M42 142 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 TSPAN18Q96SJ8 248 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 TUBGCP2Q9BSJ2 902 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 RTN4RQ9BZR6 473 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 PPIL3Q9H2H8 161 aaKnown RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 NXF3Q9H4D5 531 aaKnown RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 ASB7Q9H672 318 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 DENND2DQ9H6A0 471 aaPredicted RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 FGF22Q9HCT0 170 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 RGS18Q9NS28 235 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 SLC38A7Q9NVC3 462 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 DMAC2Q9NW81 257 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 TAB2Q9NYJ8 693 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 RBAKQ9NYW8 714 aaPredicted RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 CPSF3Q9UKF6 684 aaKnown RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 WBP11Q9Y2W2 641 aaKnown RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 PDCD11Q14690 1871 aaKnown RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 LRRIQ3A6PVS8 624 aaPredicted RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 TMEM189-UBE2V1I3L0A0 370 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 CTDSP2O14595 271 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 RSL1D1O76021 490 aaKnown RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 PGM3O95394 542 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 TFAP2AP05549 437 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ADRB2P07550 413 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 TPM1P09493 284 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 CXCL8P10145 99 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ZNF18P17022 549 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 GNAZP19086 355 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 TRIM21P19474 475 aaKnown RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 GCH1P30793 250 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 HOXC13P31276 330 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 TNFSF9P41273 254 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 NR2C2P49116 596 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 UBASH3AP57075 661 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 LMO4P61968 165 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 TFAMQ00059 246 aaKnown RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 MYL7Q01449 175 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 UBXN1Q04323 297 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ENPEPQ07075 957 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 UBE2V1Q13404 147 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ITGA9Q13797 1035 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 PSMD6Q15008 389 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 KRT31Q15323 416 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 KRT39Q6A163 491 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 SH2D5Q6ZV89 423 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 WDR49Q8IV35 697 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ZC3H3Q8IXZ2 948 aaKnown RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 TAGAPQ8N103 731 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 GBGT1Q8N5D6 347 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 PAPD5Q8NDF8 572 aaKnown RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 DDHD1Q8NEL9 900 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 PTPMT1Q8WUK0 201 aaPredicted RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 RSPH1Q8WYR4 309 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ZNF689Q96CS4 500 aaPredicted RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 DDOQ99489 341 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ASCL2Q99929 193 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 HGH1Q9BTY7 390 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 MRPL9Q9BYD2 267 aaKnown RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 TRIM15Q9C019 465 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 MMP27Q9H306 513 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 KCNK15Q9H427 330 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 GRPEL1Q9HAV7 217 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ADPRHL2Q9NX46 363 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 TMEM161AQ9NX61 479 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 ARHGEF38Q9NXL2 777 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 IFNKQ9P0W0 207 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 RASAL2Q9UJF2 1139 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 PLAGL1Q9UM63 463 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 UBQLN1Q9UMX0 589 aaKnown RBP3.64□□□□□ -1.83
UBR3-209ENST00000477461 ZNF148Q9UQR1 794 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 B3GALT5Q9Y2C3 310 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 HES2Q9Y543 173 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 SNX8Q9Y5X2 465 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 LTBP2Q14767 1821 aa3.64□□□□□ -1.83
UBR3-209ENST00000477461 SMIM28A0A1B0GU29 152 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 TTC26A0AVF1 554 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 ARL5CA6NH57 179 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 P4HA2O15460 535 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 FAM189A1O60320 539 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 AVILO75366 819 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 CSPG5O95196 566 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 HLA-DRAP01903 254 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 TRIM49P0CI25 452 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 TRIM49CP0CI26 452 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 NR2F1P10589 423 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 P4HA1P13674 534 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 CEACAM1P13688 526 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 KCNE1P15382 129 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 CYP3A5P20815 502 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 SAT1P21673 171 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms