RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 WNT3P56703 355 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 SNRPNP63162 240 aaKnown RBP27.43■■□□□ 1.98
VEGFA-211ENST00000476772 CFHR1Q03591 330 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 FOXM1Q08050 763 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 C6orf10Q5SRN2 563 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 CPTPQ5TA50 214 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 GUSBP11Q6P575 273 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 SPRED1Q7Z699 444 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 ANKRD46Q86W74 232 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 HPS6Q86YV9 775 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 FBXW8Q8N3Y1 598 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 UTP15Q8TED0 518 aaKnown RBP27.43■■□□□ 1.98
VEGFA-211ENST00000476772 CD180Q99467 661 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 RAB23Q9ULC3 237 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 VPS13AQ96RL7 3174 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 IGHV5-51A0A0C4DH38 117 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 CASC3O15234 703 aaKnown RBP27.42■■□□□ 1.98
VEGFA-211ENST00000476772 KCNH1O95259 989 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 CD1CP29017 333 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 CSF2RBP32927 897 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 SLC7A2P52569 658 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 VSX2P58304 361 aaPredicted RBP27.42■■□□□ 1.98
VEGFA-211ENST00000476772 KLC1Q07866 573 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 TGM3Q08188 693 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 PDE7AQ13946 482 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 ZNF385BQ569K4 471 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 PIGGQ5H8A4 983 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 MSANTD1Q6ZTZ1 278 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 ACOT4Q8N9L9 421 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 OR6C4Q8NGE1 309 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 ZCCHC10Q8TBK6 192 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 COQ8BQ96D53 544 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 TCTN2Q96GX1 697 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 PRPF18Q99633 342 aaKnown RBP27.42■■□□□ 1.98
VEGFA-211ENST00000476772 CCDC3Q9BQI4 270 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 DUSP26Q9BV47 211 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 RMND5AQ9H871 391 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 SERHLQ9NQF3 203 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 SH3BP4Q9P0V3 963 aa27.42■■□□□ 1.98
VEGFA-211ENST00000476772 CPED1A4D0V7 1026 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 PCDHGA12O60330 932 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 NPPAP01160 153 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 CERS1P27544 350 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 TSFMP43897 325 aaKnown RBP27.41■■□□□ 1.98
VEGFA-211ENST00000476772 CEACAM7Q14002 265 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 PRMT9Q6P2P2 845 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 USP53Q70EK8 1073 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 R3HCC1LQ7Z5L2 792 aaKnown RBP27.41■■□□□ 1.98
VEGFA-211ENST00000476772 DNAJC22Q8N4W6 341 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 CSNK1A1LQ8N752 337 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 RNF148Q8N7C7 305 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 DNAJB14Q8TBM8 379 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 TMEM181Q9P2C4 612 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 MAN2B2Q9Y2E5 1009 aa27.41■■□□□ 1.98
VEGFA-211ENST00000476772 PRR33A8MZF0 331 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 KHNYNO15037 678 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 SCN2BO60939 215 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 RASSF9O75901 435 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 PNLIPP16233 465 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 SLC6A2P23975 617 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 RPL3P39023 403 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 ZC3H12BQ5HYM0 836 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 PERM1Q5SV97 790 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 DNAJC14Q6Y2X3 702 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 PLXDC1Q8IUK5 500 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 KIAA2013Q8IYS2 634 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 ZCCHC7Q8N3Z6 543 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 ZNF655Q8N720 491 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 CCDC124Q96CT7 223 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 ITCHQ96J02 903 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 INPP5KQ9BT40 448 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 TRIM8Q9BZR9 551 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 FAM120CQ9NX05 1096 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 TEX10Q9NXF1 929 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 TMEM9Q9P0T7 183 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 WBP11Q9Y2W2 641 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 NEUROG3Q9Y4Z2 214 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 CROCCQ5TZA2 2017 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 URADA6NGE7 173 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 FAM58BPP0C7Q3 252 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 SMIM10L1P0DMW3 83 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 MLLT3P42568 568 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 GSTM5P46439 218 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 NUBP1P53384 320 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 TRA2BP62995 288 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 BTN3A2P78410 334 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 SLAMF1Q13291 335 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 MCATQ8IVS2 390 aaKnown RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 WDR60Q8WVS4 1066 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 PPCDCQ96CD2 204 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 MTERF3Q96E29 417 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 SMIM10Q96HG1 83 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 KCNH6Q9H252 994 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 DENND2DQ9H6A0 471 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 COPS7BQ9H9Q2 264 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-211ENST00000476772 SOHLH2Q9NX45 425 aa27.4■■□□□ 1.98
VEGFA-211ENST00000476772 ASXL3Q9C0F0 2248 aa27.39■■□□□ 1.98
VEGFA-211ENST00000476772 ZSCAN9O15535 394 aaPredicted RBP27.39■■□□□ 1.97
VEGFA-211ENST00000476772 CIB2O75838 187 aa27.39■■□□□ 1.97
VEGFA-211ENST00000476772 C9P02748 559 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms