RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 FCGR3BO75015 233 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 SLU7O95391 586 aaKnown RBP5.08□□□□□ -1.6
SMC5-203ENST00000475540 VIMP08670 466 aaKnown RBP5.08□□□□□ -1.6
SMC5-203ENST00000475540 GOT1P17174 413 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 CTNNA2P26232 953 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 FEN1P39748 380 aaKnown RBP5.08□□□□□ -1.6
SMC5-203ENST00000475540 WASHC5Q12768 1159 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 GRB14Q14449 540 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 C15orf32Q32M92 178 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 RAPH1Q70E73 1250 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 TRMT11Q7Z4G4 463 aaKnown RBP5.08□□□□□ -1.6
SMC5-203ENST00000475540 TEX26Q8N6G2 289 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 TMCO5AQ8N6Q1 288 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.08□□□□□ -1.6
SMC5-203ENST00000475540 GDAP1Q8TB36 358 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 SETD6Q8TBK2 473 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 UBAC1Q9BSL1 405 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 INPP5KQ9BT40 448 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 UBQLN3Q9H347 655 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 GPR83Q9NYM4 423 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 SATB2Q9UPW6 733 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 KNSTRNQ9Y448 316 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 KLK4Q9Y5K2 254 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 SRRM5B3KS81 715 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 OGTO15294 1046 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 INPP4BO15327 924 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 TNFSF12O43508 249 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 BCL2L11O43521 198 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 ADORA3P0DMS8 318 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 STMN1P16949 149 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 ADRA2CP18825 462 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 PSMB4P28070 264 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 NDUFV3P56181 108 aaKnown RBP5.07□□□□□ -1.6
SMC5-203ENST00000475540 BTG1P62324 171 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 PPA1Q15181 289 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 TTC31Q49AM3 519 aaPredicted RBP5.07□□□□□ -1.6
SMC5-203ENST00000475540 C15orf52Q6ZUT6 534 aaKnown RBP5.07□□□□□ -1.6
SMC5-203ENST00000475540 METTL23Q86XA0 190 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 DZIP1Q86YF9 867 aaKnown RBP5.07□□□□□ -1.6
SMC5-203ENST00000475540 NUP93Q8N1F7 819 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 OR8H1Q8NGG4 311 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 MGARPQ8TDB4 240 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 DEPDC1BQ8WUY9 529 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 CCDC47Q96A33 483 aaKnown RBP5.07□□□□□ -1.6
SMC5-203ENST00000475540 FAM120CQ9NX05 1096 aaKnown RBP5.07□□□□□ -1.6
SMC5-203ENST00000475540 TMOD3Q9NYL9 352 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 STYXL1Q9Y6J8 313 aa5.07□□□□□ -1.6
SMC5-203ENST00000475540 ARHGEF37A1IGU5 675 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 HTR3EA5X5Y0 456 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 ARHGEF33A8MVX0 844 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 FAM86B1E9PN63 330 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 PGRMC2O15173 223 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 WDR46O15213 610 aaKnown RBP5.06□□□□□ -1.6
SMC5-203ENST00000475540 FAM86B2P0C5J1 330 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 SP9P0CG40 484 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 EEF2P13639 858 aaKnown RBP5.06□□□□□ -1.6
SMC5-203ENST00000475540 FOLR2P14207 255 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 SELEP16581 610 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 ATP4BP51164 291 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 SRPXP78539 464 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 GCKRQ14397 625 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 CDO1Q16878 200 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 LRRC37A5PQ49AS3 106 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.06□□□□□ -1.6
SMC5-203ENST00000475540 FAM46CQ5VWP2 391 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 DCLRE1AQ6PJP8 1040 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 Q6ZR54 194 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 TIPARPQ7Z3E1 657 aaKnown RBP5.06□□□□□ -1.6
SMC5-203ENST00000475540 MARCH9Q86YJ5 346 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 ST6GALNAC6Q969X2 333 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 CCDC43Q96MW1 224 aaKnown RBP5.06□□□□□ -1.6
SMC5-203ENST00000475540 TSSK2Q96PF2 358 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 PCDHB18PQ96TA0 734 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 CITED2Q99967 270 aaPredicted RBP5.06□□□□□ -1.6
SMC5-203ENST00000475540 DPEP2Q9H4A9 486 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 PDRG1Q9NUG6 133 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 TP53TG3Q9ULZ0 132 aa5.06□□□□□ -1.6
SMC5-203ENST00000475540 AGRNO00468 2067 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 SIGLEC5O15389 551 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 LRCH4O75427 683 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 HPP00738 406 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 LBPP18428 481 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 GP5P40197 560 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 PTENP60484 403 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 UBXN1Q04323 297 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 MLF2Q15773 248 aaPredicted RBP5.05□□□□□ -1.6
SMC5-203ENST00000475540 TXNRD3NBQ6F5E7 133 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 TCEAL6Q6IPX3 200 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 PET117Q6UWS5 81 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 TMEM182Q6ZP80 229 aaPredicted RBP5.05□□□□□ -1.6
SMC5-203ENST00000475540 Q6ZVQ6 151 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 HPS6Q86YV9 775 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 C4orf19Q8IY42 314 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 DND1Q8IYX4 353 aaKnown RBP5.05□□□□□ -1.6
SMC5-203ENST00000475540 FAM162AQ96A26 154 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 ADNPQ9H2P0 1102 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 IL1RAPQ9NPH3 570 aa5.05□□□□□ -1.6
SMC5-203ENST00000475540 CHCHD3Q9NX63 227 aaKnown RBP5.05□□□□□ -1.6
SMC5-203ENST00000475540 DBF4Q9UBU7 674 aaPredicted RBP5.05□□□□□ -1.6
SMC5-203ENST00000475540 PILRAQ9UKJ1 303 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms