RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PSMD12O00232 456 aaPredicted RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 STX7O15400 261 aaKnown RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 GRID2O43424 1007 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 BMP15O95972 392 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CFIP05156 583 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 EPHX1P07099 455 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 HTR1AP08908 422 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 H2AFB1P0C5Y9 115 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 PPP3CBP16298 524 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 DRD1P21728 446 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 SSTR2P30874 369 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 UQCRC1P31930 480 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 MPLP40238 635 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 VHLP40337 213 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 MTNR1BP49286 362 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ZNF75DP51815 510 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 PNLIPRP2P54317 469 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ST8SIA6P61647 398 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 HERVK_113P63132 956 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 DHODHQ02127 395 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 MPPED2Q15777 294 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CHI3L2Q15782 390 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ZNF691Q5VV52 312 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 FBXW9Q5XUX1 488 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 C15orf39Q6ZRI6 1047 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ASRGL1Q7L266 308 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CYFIP1Q7L576 1253 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 HDDC2Q7Z4H3 204 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 HS3ST5Q8IZT8 346 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 UXS1Q8NBZ7 420 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 DNAJB14Q8TBM8 379 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CXorf40AQ8TE69 158 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ECHDC3Q96DC8 303 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 AMDHD1Q96NU7 426 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 PRAP1Q96NZ9 151 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 TMEM109Q9BVC6 243 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 RAB17Q9H0T7 212 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 GANQ9H2C0 597 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 SCUBE2Q9NQ36 999 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 BIN3Q9NQY0 253 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 FBXO8Q9NRD0 319 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 DNMT3BQ9UBC3 853 aaKnown RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 STOML1Q9UBI4 398 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ZNF225Q9UK10 706 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CDH7Q9ULB5 785 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ST3GAL5Q9UNP4 418 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 PLA2G4CQ9UP65 541 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 HS3ST4Q9Y661 456 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 TEX13DA0A0J9YY54 714 aaPredicted RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 LIPT2A6NK58 231 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 PP2D1A8MPX8 630 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 BCKDKO14874 412 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 FLRT2O43155 660 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 FZD7O75084 574 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 GLCEO94923 617 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 S100A8P05109 93 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ANXA4P09525 319 aaPredicted RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 SLC35E2BP0CK96 405 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 SLC35E2P0CK97 266 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 KITP10721 976 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ZNF250P15622 560 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 DNASE1P24855 282 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 GRM5P41594 1212 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 SERPINB10P48595 397 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CHN2P52757 468 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ACTR2P61160 394 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 NCALDP61601 193 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 COPZ1P61923 177 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 RPS15P62841 145 aaKnown RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 MYBPC1Q00872 1141 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 IL9RQ01113 521 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 PTP4A2Q12974 167 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 RAB32Q13637 225 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ITIH4Q14624 930 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 SLC17A1Q14916 467 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 TRAM1Q15629 374 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 PSMD5Q16401 504 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 C3orf38Q5JPI3 329 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 C9orf50Q5SZB4 431 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ZBTB37Q5TC79 503 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 PRAMEF8Q5VWM4 474 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 INO80CQ6PI98 192 aaPredicted RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 SPNS3Q6ZMD2 512 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 RD3Q7Z3Z2 195 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 FAM129CQ86XR2 697 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 SLC35F3Q8IY50 421 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 BHLHE22Q8NFJ8 381 aaPredicted RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 OR2D3Q8NGH3 330 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CYP2W1Q8TAV3 490 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 TBC1D16Q8TBP0 767 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 C16orf78Q8WTQ4 265 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ZHX1-C8orf76Q96EF9 292 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CHP1Q99653 195 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 CPNE1Q99829 537 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 FERMT1Q9BQL6 677 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 GSX2Q9BZM3 304 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 TRABDQ9H4I3 376 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 TMEM185BQ9H7F4 350 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 ADARB2Q9NS39 739 aaKnown RBP3.34□□□□□ -1.87
UBR3-208ENST00000474426 NDUFAF4Q9P032 175 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms