RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CTF1Q16619 201 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 UGT3A2Q3SY77 523 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 XKR9Q5GH70 373 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 C10orf120Q5SQS8 335 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 CCNYL2Q5T2Q4 361 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 DENND2CQ68D51 928 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ARHGAP17Q68EM7 881 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 B3GLCTQ6Y288 498 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 Q6ZPA2 131 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 C19orf35Q6ZS72 473 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 KIAA1328Q86T90 577 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 MAP7D3Q8IWC1 876 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 OFCC1Q8IZS5 231 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 EID3Q8N140 333 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 C1orf52Q8N6N3 182 aaKnown RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 SLC24A4Q8NFF2 622 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 CTNNBL1Q8WYA6 563 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 THOC3Q96J01 351 aaKnown RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 PDLIM2Q96JY6 352 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 C3orf30Q96M34 536 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 DEFB118Q96PH6 123 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ALKBH7Q9BT30 221 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 TMEM45AQ9NWC5 275 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 OR6C2Q9NZP2 312 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 AGO2Q9UKV8 859 aaKnown RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 FOXJ3Q9UPW0 622 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 SLC4A4Q9Y6R1 1079 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 COL5A2P05997 1499 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 TTC21BQ7Z4L5 1316 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 PIK3C2GO75747 1445 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 H0YC42 278 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 KRT86O43790 486 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 EFNA2O43921 213 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 DFNA5O60443 496 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 C1QL1O75973 258 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 PABPC4LP0CB38 370 aaKnown RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 TNFRSF4P43489 277 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 NR2C2P49116 596 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 DMTNQ08495 405 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 TRAF3Q13114 568 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 CUL3Q13618 768 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 HNRNPDQ14103 355 aaKnown RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 KRT81Q14533 505 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 PDIA5Q14554 519 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 ZNF169Q14929 603 aaPredicted RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 ZMYND11Q15326 602 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 TRIP10Q15642 601 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 NPTX1Q15818 432 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 KRT24Q2M2I5 525 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 ITPRIPL2Q3MIP1 535 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 ZNF528Q3MIS6 628 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 PDSS1Q5T2R2 415 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 CAPN13Q6MZZ7 669 aaPredicted RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 KCNIP4Q6PIL6 250 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 KCNV1Q6PIU1 500 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 CCDC73Q6ZRK6 1079 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 SLC16A12Q6ZSM3 486 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 TPRG1Q6ZUI0 275 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 TTLL10Q6ZVT0 673 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 LUZP1Q86V48 1076 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 SATL1Q86VE3 508 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 UEVLDQ8IX04 471 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 CDK20Q8IZL9 346 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 SLC38A6Q8IZM9 456 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 CENPLQ8N0S6 344 aaPredicted RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 PGBD5Q8N414 524 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 TEX45Q8NA69 505 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 STEAP2Q8NFT2 490 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 GPR148Q8TDV2 347 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 DQX1Q8TE96 717 aaKnown RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 TMEM174Q8WUU8 243 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 ADAMTS14Q8WXS8 1223 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 DDB2Q92466 427 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 GGHQ92820 318 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 CAVIN3Q969G5 261 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 TAAR8Q969N4 342 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 NAP1L3Q99457 506 aaPredicted RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 MTERF1Q99551 399 aaKnown RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 EGFL8Q99944 293 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 QTRT1Q9BXR0 403 aaKnown RBP2.46□□□□□ -2.01
XRN1-210ENST00000472697 LCMT1Q9UIC8 334 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 PILRAQ9UKJ1 303 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 U3KQV3 271 aa2.46□□□□□ -2.01
XRN1-210ENST00000472697 LTBP1Q14766 1721 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 KDM6AO15550 1401 aaPredicted RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 KIR2DS5A0A0G2JLQ3 304 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 MTMR11A4FU01 709 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 GOLGA8OA6NCC3 632 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 ZNF814B7Z6K7 855 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 GOLGA8NF8WBI6 632 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 MS4A18H0YCH9 400 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 H0YL77 283 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 H7C1Q1 480 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 KIR2DS3K7RE56 304 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 SPINT2O43291 252 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 CSDE1O75534 798 aaKnown RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 CH25HO95992 272 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 ARF4P18085 180 aaPredicted RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 CYLC1P35663 651 aaPredicted RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 ELAVL3Q14576 367 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms