RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 ARNT2Q9HBZ2 717 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PDLIM7Q9NR12 457 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 STARD5Q9NSY2 213 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 CCDC182A6NF36 153 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 RGS10O43665 173 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 STC2O76061 302 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 GADD45AP24522 165 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 SLC15A1P46059 708 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 CDK9P50750 372 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 CRISP1P54107 249 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ABATP80404 500 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 KPNB1Q14974 876 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 CA9Q16790 459 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PPM1JQ5JR12 505 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 CLLU1OSQ5K130 101 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PLEKHS1Q5SXH7 462 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 FRG2Q64ET8 278 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PAQR3Q6TCH7 311 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ARHGAP12Q8IWW6 846 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 FRG2BQ96QU4 278 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 HOPXQ9BPY8 73 aaPredicted RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 ABCB10Q9NRK6 738 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ZNF355PQ9NSJ1 428 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 KCNIP1Q9NZI2 227 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 SMCO3A2RU48 225 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ADAMDEC1O15204 470 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 BCAS2O75934 225 aaPredicted RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 FAM153BP0C7A2 387 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 SRP14P37108 136 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 POU5F1Q01860 360 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 TGFBR3Q03167 851 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 FAM78AQ5JUQ0 283 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 RCBTB1Q8NDN9 531 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 IFI44Q8TCB0 444 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 KCNE4Q8WWG9 221 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 FAXDC2Q96IV6 333 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 TBC1D24Q9ULP9 559 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 DFNA5O60443 496 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ITGA10O75578 1167 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 RCBTB2O95199 551 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 FADS2O95864 444 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 ADSSP30520 456 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 CCT3P49368 545 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 VASPP50552 380 aaPredicted RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 EEF1A1P68104 462 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 CAMK2DQ13557 499 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ATP1A4Q13733 1029 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PTPRCAPQ14761 206 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ZNF687Q8N1G0 1237 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 TM9SF2Q99805 663 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 TTYH2Q9BSA4 534 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 LTN1O94822 1766 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 ARGFXA6NJG6 315 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 KLK10O43240 276 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 EGFP01133 1207 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 MSL3P1P0C860 447 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 CD70P32970 193 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 SLC25A3Q00325 362 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 LASP1Q14847 261 aaKnown RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 FAM174BQ3ZCQ3 159 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 CST9Q5W186 159 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 LINGO2Q7L985 606 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 CLVS1Q8IUQ0 354 aaPredicted RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 FBXL16Q8N461 479 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 KBTBD8Q8NFY9 601 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 TMEM185BQ9H7F4 350 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 SLC6A14Q9UN76 642 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 EMC9Q9Y3B6 208 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 A0A0J9YY10 115 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 C2orf92A0A1B0GVN3 265 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 VNN1O95497 513 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 SLC6A11P48066 632 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 GRIN2CQ14957 1233 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 MAD2L1BPQ15013 274 aaPredicted RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 RASGEF1CQ8N431 466 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 ZNF548Q8NEK5 533 aaPredicted RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 ALPK1Q96QP1 1244 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 PKP4Q99569 1192 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 TFB2MQ9H5Q4 396 aaKnown RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 PREBQ9HCU5 417 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 EMC3Q9P0I2 261 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 WDR45Q9Y484 360 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 KLRC4-KLRK1H3BQV0 150 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 NRP2O60462 931 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 ZBTB11O95625 1053 aaPredicted RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 APOC1P02654 83 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 SIRPAP78324 504 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 PPIDQ08752 370 aaKnown RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 SERINC3Q13530 473 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 GALNT12Q8IXK2 581 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 RBM12BQ8IXT5 1001 aaKnown RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 FUKQ8N0W3 1084 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 GAB3Q8WWW8 586 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 PYDC1Q8WXC3 89 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 C11orf24Q96F05 449 aaPredicted RBP8.26□□□□□ -1.09
CD47-204ENST00000471694 FNIP2Q9P278 1114 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 GNG8Q9UK08 70 aa8.26□□□□□ -1.09
CD47-204ENST00000471694 FZD4Q9ULV1 537 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms