RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 BNC2Q6ZN30 1099 aaPredicted RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 RIPOR1Q6ZS17 1223 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 NDUFAF7Q7L592 441 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 C10orf107Q8IVU9 208 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 RAB42Q8N4Z0 105 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 OR2L3Q8NG85 312 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 OR2A1Q8NGT9 310 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 CFAP61Q8NHU2 1237 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 BRIX1Q8TDN6 353 aaKnown RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 CKAP2Q8WWK9 683 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 ATL1Q8WXF7 558 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 EXT2Q93063 718 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 C8orf44Q96CB5 159 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 MVB12AQ96EY5 273 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 C10orf90Q96M02 699 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 MAGEB18Q96M61 343 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 CCDC138Q96M89 665 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 EGFL8Q99944 293 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 CCDC134Q9H6E4 229 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 C14orf105Q9NVL8 296 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 OXSMQ9NWU1 459 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 ARL15Q9NXU5 204 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 UTP6Q9NYH9 597 aaKnown RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 ABI3Q9P2A4 366 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 MRPS2Q9Y399 296 aaKnown RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 TNPO3Q9Y5L0 923 aaKnown RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 FBN2P35556 2912 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 CSMD2Q7Z408 3487 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 LOC105369274A0A096LPK9 316 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 IGHV1-45A0A0A0MS14 117 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 LOC102723532A0A0G2JNH3 316 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 A0A0J9YVX5 310 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 A0A1W2PPV9 198 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 WDR91A4D1P6 747 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 IDSB3KWA1 339 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 KLF11O14901 512 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 NRP2O60462 931 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 BMP10O95393 424 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 GUCA1CO95843 209 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 FBLP22087 321 aaKnown RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 CXCR2P25025 360 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 GRK2P25098 689 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 PSMB5P28074 263 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 HSD17B2P37059 387 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 CA7P43166 264 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 BDKRB1P46663 353 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 HERVK_113P63132 956 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 GUCY1A3Q02108 690 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 DSG2Q14126 1118 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 ARHGAP19Q14CB8 494 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 CHI3L2Q15782 390 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 PFKFB4Q16877 469 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF630Q2M218 657 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 ZXDCQ2QGD7 858 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 PRTGQ2VWP7 1150 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 VWA2Q5GFL6 755 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 ATG16L1Q676U5 607 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 MTFR2Q6P444 385 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 GFRALQ6UXV0 394 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 RPTNQ6XPR3 784 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 RGS9BPQ6ZS82 235 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 GDF7Q7Z4P5 450 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 ZGRF1Q86YA3 2104 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 OR4N4Q8N0Y3 316 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF808Q8N4W9 903 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 PTGR2Q8N8N7 351 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 OR9A1PQ8NGU1 263 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 DNAJB8Q8NHS0 232 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 PPP1R14CQ8TAE6 165 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 LRRC8CQ8TDW0 803 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 UBTD2Q8WUN7 234 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 RHBDF1Q96CC6 855 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 FBXL8Q96CD0 374 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 L3HYPDHQ96EM0 354 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 CCDC120Q96HB5 630 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 MAGEB10Q96LZ2 347 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 MIPEPQ99797 713 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 ZFYVE21Q9BQ24 234 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 MECRQ9BV79 373 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 C1QTNF3Q9BXJ4 246 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 ERVK-6Q9BXR3 956 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 TGIF2Q9GZN2 237 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 CHST11Q9NPF2 352 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 RIC8BQ9NVN3 520 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 WWOXQ9NZC7 414 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 SPATA7Q9P0W8 599 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 PTGFRNQ9P2B2 879 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 SUCOQ9UBS9 1254 aaKnown RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 PTBP2Q9UKA9 531 aaKnown RBP8.58□□□□□ -1.04
SF3A1-206ENST00000471037 CDC14AQ9UNH5 594 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 PDZD2O15018 2839 aa8.58□□□□□ -1.04
SF3A1-206ENST00000471037 LOC102723996A0A087X1L8 192 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 NCF1BA6NI72 391 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF839A8K0R7 811 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 NCF1CA8MVU1 366 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 TMEM114B3SHH9 223 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 SNUPNO95149 360 aaKnown RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 UNC5CO95185 931 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms