RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 TFEBP19484 476 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 BTN3A2P78410 334 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 REEP5Q00765 189 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 ZNF460Q14592 562 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 BBS9Q3SYG4 887 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 XKR6Q5GH73 641 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 EMC4Q5J8M3 183 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 TOR1AIP1Q5JTV8 583 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 NXPE4Q6UWF7 544 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 SBSNQ6UWP8 590 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 ABHD13Q7L211 337 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 TMPRSS11BQ86T26 416 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 CDH24Q86UP0 819 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 LRRC8AQ8IWT6 810 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 PHF10Q8WUB8 498 aaKnown RBP11.44□□□□□ -0.58
HDAC3-204ENST00000469207 CHTF18Q8WVB6 975 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 C14orf79Q96F83 325 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 CERS2Q96G23 380 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 PDLIM2Q96JY6 352 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 PBKQ96KB5 322 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 MCCC2Q9HCC0 563 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 KCMF1Q9P0J7 381 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 PPP2R2CQ9Y2T4 447 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 MED13LQ71F56 2210 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 TMEM200CA6NKL6 621 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 FAM90A27PA6NNH2 459 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 G3V3Y1 287 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 KLRC4-KLRK1H3BQV0 150 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 PSMD12O00232 456 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-204ENST00000469207 ITGA10O75578 1167 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 KRT38O76015 456 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 RNH1P13489 461 aaKnown RBP11.43□□□□□ -0.58
HDAC3-204ENST00000469207 AHRP35869 848 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 CLCN2P51788 898 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 GPR143P51810 404 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 FBXO48Q5FWF7 155 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 SPANXN3Q5MJ09 141 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 STRA8Q7Z7C7 330 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 CLNKQ7Z7G1 428 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 CNTN4Q8IWV2 1026 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 CYP4Z2PQ8N1L4 340 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 TMEM156Q8N614 296 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 B3GNT7Q8NFL0 401 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 C16orf52Q8NHV5 167 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 NRGNQ92686 78 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 NCLNQ969V3 563 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 CFAP36Q96G28 342 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 WDR83Q9BRX9 315 aaKnown RBP11.43□□□□□ -0.58
HDAC3-204ENST00000469207 TRIM54Q9BYV2 358 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-204ENST00000469207 COQ3Q9NZJ6 369 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 TNFRSF10DQ9UBN6 386 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 RNF6Q9Y252 685 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 DYRK1BQ9Y463 629 aa11.43□□□□□ -0.58
HDAC3-204ENST00000469207 A0A0G2JMM0 328 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 A0A1W2PPB8 328 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 A0A1W2PRS3 328 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 PABPN1LA6NDY0 278 aaKnown RBP11.42□□□□□ -0.58
HDAC3-204ENST00000469207 NPEPPSL1A6NEC2 478 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 KIR3DP1A8MWS1 328 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 FCHO1O14526 889 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 DNALI1O14645 258 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-204ENST00000469207 DIAPH2O60879 1101 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 PIAS1O75925 651 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 TBX6O95947 436 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-204ENST00000469207 IVDP26440 423 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 HNRNPH1P31943 449 aaKnown RBP11.42□□□□□ -0.58
HDAC3-204ENST00000469207 ELK3P41970 407 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 AP1S2P56377 157 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 PMPCAQ10713 525 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 PPP1R7Q15435 360 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 PPP1R3AQ16821 1122 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 ZNF750Q32MQ0 723 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 ADNP2Q6IQ32 1131 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 IL20RBQ6UXL0 311 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 ARMC10Q8N2F6 343 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 TBC1D19Q8N5T2 526 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 ZNF321PQ8N8H1 164 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 ZFP62Q8NB50 900 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-204ENST00000469207 TRPV3Q8NET8 790 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 ANKRD49Q8WVL7 239 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 CCT6BQ92526 530 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 TREX2Q9BQ50 279 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-204ENST00000469207 AIF1LQ9BQI0 150 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 DDX47Q9H0S4 455 aaKnown RBP11.42□□□□□ -0.58
HDAC3-204ENST00000469207 PELI2Q9HAT8 420 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 PRTFDC1Q9NRG1 225 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 CHMP2BQ9UQN3 213 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 KLF13Q9Y2Y9 288 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-204ENST00000469207 JRKLQ9Y4A0 524 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 PSAT1Q9Y617 370 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 C2CD3Q4AC94 2353 aa11.42□□□□□ -0.58
HDAC3-204ENST00000469207 FAM166BA8MTA8 275 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 NPIPA2E9PIF3 369 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 NPIPA3F8WFD2 350 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 PGRMC1O00264 195 aaKnown RBP11.41□□□□□ -0.58
HDAC3-204ENST00000469207 WWP2O00308 870 aa11.41□□□□□ -0.58
HDAC3-204ENST00000469207 ZNF354AO60765 605 aaPredicted RBP11.41□□□□□ -0.58
HDAC3-204ENST00000469207 OR2J2O76002 312 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms