RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 DPH2Q9BQC3 489 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 HDHD5Q9BXW7 423 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 PAK6Q9NQU5 681 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 C14orf119Q9NWQ9 140 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 RAPGEFL1Q9UHV5 662 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 LEF1Q9UJU2 399 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 RPH3AQ9Y2J0 694 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 KNTC1P50748 2209 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 CKAP5Q14008 2032 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 GVINP1Q7Z2Y8 2422 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 MGAT4DA6NG13 374 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 HMX3A6NHT5 357 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 OR2B3O76000 313 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 ALPPL2P10696 532 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 ITGA2P17301 1181 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 PTNP21246 168 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 GPX3P22352 226 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 ACRV1P26436 265 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 TIE1P35590 1138 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 NSG1P42857 185 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 GNPDA1P46926 289 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 POLR2LP62875 67 aaKnown RBP11.87□□□□□ -0.51
USP11-206ENST00000469080 ZNF181Q2M3W8 571 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 HKDC1Q2TB90 917 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 Q6ZSR9 355 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 R3HCC1LQ7Z5L2 792 aaKnown RBP11.87□□□□□ -0.51
USP11-206ENST00000469080 TRIM48Q8IWZ4 208 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 OR52J3Q8NH60 311 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 GOT1L1Q8NHS2 421 aaPredicted RBP11.87□□□□□ -0.51
USP11-206ENST00000469080 ISL2Q96A47 359 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 ZHX1-C8orf76Q96EF9 292 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 PANX1Q96RD7 426 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 P2RY13Q9BPV8 354 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 KXD1Q9BQD3 176 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 TRPM6Q9BX84 2022 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 SCN3AQ9NY46 2000 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 PDYNP01213 254 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 TNNI3P19429 210 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 DDOSTP39656 456 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 PRKAG1P54619 331 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 PWP1Q13610 501 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 ADPRMQ3LIE5 342 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 UBQLNLQ8IYU4 475 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 OR4K1Q8NGD4 311 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 MUS81Q96NY9 551 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 TINAGL1Q9GZM7 467 aaPredicted RBP11.87□□□□□ -0.51
USP11-206ENST00000469080 OR51B5Q9H339 312 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 RERGLQ9H628 205 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 C5AR2Q9P296 337 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 E2F3O00716 465 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 TULP3O75386 442 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 RFX3P48380 749 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 RUNX1T1Q06455 604 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 LEXMQ3ZCV2 418 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 INO80DQ53TQ3 878 aaPredicted RBP11.87□□□□□ -0.51
USP11-206ENST00000469080 CYHR1Q6ZMK1 362 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 NLGN4XQ8N0W4 816 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 C9orf16Q9BUW7 83 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 SGK2Q9HBY8 427 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 IMP3Q9NV31 184 aaKnown RBP11.87□□□□□ -0.51
USP11-206ENST00000469080 SPATA2Q9UM82 520 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 PDE10AQ9Y233 779 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 DLGAP4Q9Y2H0 992 aa11.87□□□□□ -0.51
USP11-206ENST00000469080 LINC00587B1AMM8 73 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 H3BM21 787 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 RTCAO00442 366 aaKnown RBP11.86□□□□□ -0.51
USP11-206ENST00000469080 CLDN9O95484 217 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 C1QCP02747 245 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 PSMB9P28065 219 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 GDI2P50395 445 aaKnown RBP11.86□□□□□ -0.51
USP11-206ENST00000469080 SIM2Q14190 667 aaPredicted RBP11.86□□□□□ -0.51
USP11-206ENST00000469080 PCBP2Q15366 365 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■■□□□ 14
USP11-206ENST00000469080 CERS6Q6ZMG9 384 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 SLC16A12Q6ZSM3 486 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 PELI3Q8N2H9 469 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 OR2T12Q8NG77 320 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 RELTQ969Z4 430 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 SLCO4A1Q96BD0 722 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 PPA2Q9H2U2 334 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 SMURF2Q9HAU4 748 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 FBXO8Q9NRD0 319 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP11-206ENST00000469080 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 UTS2RQ9UKP6 389 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 SARDHQ9UL12 918 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 RFXANKO14593 260 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 LDLRP01130 860 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 IGHA2P01877 340 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 ATP1B2P14415 290 aaPredicted RBP11.86□□□□□ -0.51
USP11-206ENST00000469080 SLC6A2P23975 617 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 CLCN7P51798 805 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 MFSD13AQ14CX5 517 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 BCL7AQ4VC05 210 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 XAF1Q6GPH4 301 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 BRAT1Q6PJG6 821 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 LIPIQ6XZB0 460 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 ZNF767PQ75MW2 155 aa11.86□□□□□ -0.51
USP11-206ENST00000469080 PRSS42Q7Z5A4 293 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms