RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 KHDRBS2Q5VWX1 349 aaKnown RBP12.86□□□□□ -0.35
SSBP1-206ENST00000467681 LETMD1Q6P1Q0 360 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 TRIM40Q6P9F5 258 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 PCSK4Q6UW60 755 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 GPRIN3Q6ZVF9 776 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 MRGPREQ86SM8 312 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 C10orf107Q8IVU9 208 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 TMEM102Q8N9M5 508 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-206ENST00000467681 PLPP5Q8NEB5 264 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 TBC1D20Q96BZ9 403 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 PEX11GQ96HA9 241 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 OR1F2PQ96R84 312 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 ZNF382Q96SR6 550 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 ROGDIQ9GZN7 287 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 OR51B5Q9H339 312 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 CENPHQ9H3R5 247 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 GSTO2Q9H4Y5 243 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 PRM3Q9NNZ6 103 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 DMRT3Q9NQL9 472 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 SLC17A7Q9P2U7 560 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 MKL2Q9ULH7 1088 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 PPT2Q9UMR5 302 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 HS3ST3B1Q9Y662 390 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 MGAQ8IWI9 3026 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 A0A088AWK7 358 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 A0A0G2JN53 185 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 MAGEB17A8MXT2 336 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 SOCS6O14544 535 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 PCDH17O14917 1159 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 ATXN7O15265 892 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-206ENST00000467681 B3GALT2O43825 422 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 TRIM13O60858 407 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 SH3BGRLO75368 114 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 OR4F21O95013 312 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 HEXBP07686 556 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 CYC1P08574 325 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 RNH1P13489 461 aaKnown RBP12.85□□□□□ -0.35
SSBP1-206ENST00000467681 ZNF10P21506 573 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-206ENST00000467681 ATP5A1P25705 553 aaKnown RBP12.85□□□□□ -0.35
SSBP1-206ENST00000467681 ARFIP1P53367 373 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 MTTPP55157 894 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 PKNOX1P55347 436 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 RPS13P62277 151 aaKnown RBP12.85□□□□□ -0.35
SSBP1-206ENST00000467681 PHEXP78562 749 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 LCP2Q13094 533 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 CUL3Q13618 768 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 CASP8Q14790 479 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 AP5B1Q2VPB7 878 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 TUBB8Q3ZCM7 444 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 SGO1Q5FBB7 561 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 CFAP157Q5JU67 520 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 TTC19Q6DKK2 380 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-206ENST00000467681 CA13Q8N1Q1 262 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 RNF175Q8N4F7 328 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 EXD3Q8N9H8 876 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 RGMAQ96B86 450 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 ZBTB9Q96C00 473 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 MTFMTQ96DP5 389 aaKnown RBP12.85□□□□□ -0.35
SSBP1-206ENST00000467681 VPS50Q96JG6 964 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 FER1L6-AS2Q96M78 137 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 KCNC2Q96PR1 638 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 FAM111AQ96PZ2 611 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 SERINC2Q96SA4 455 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 VN1R1Q9GZP7 353 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 ING2Q9H160 280 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 SSU72Q9NP77 194 aaKnown RBP12.85□□□□□ -0.35
SSBP1-206ENST00000467681 LANCL2Q9NS86 450 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 TRPS1Q9UHF7 1281 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 SNX6Q9UNH7 406 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 STK38LQ9Y2H1 464 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 ACTL7BQ9Y614 415 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 COL6A6A6NMZ7 2263 aa12.85□□□□□ -0.35
SSBP1-206ENST00000467681 SCN2AQ99250 2005 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 OR2W5A6NFC9 320 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 ARGFXA6NJG6 315 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 FAM227AF5H4B4 570 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 AGPSO00116 658 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 MANBAO00462 879 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 UBFD1O14562 309 aaKnown RBP12.84□□□□□ -0.35
SSBP1-206ENST00000467681 ALOX12BO75342 701 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 SCELO95171 688 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 ESRRBO95718 433 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 FHP07954 510 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 MYZAPP0CAP1 466 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 ALDH3A1P30838 453 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 RRADP55042 308 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 POLE2P56282 527 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 IFT88Q13099 833 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 PCLAFQ15004 111 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 LIPMQ5VYY2 423 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 OR4C11Q6IEV9 310 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 TMEM205Q6UW68 189 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 ACOT4Q8N9L9 421 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 OR11G2Q8NGC1 345 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 METTL6Q8TCB7 284 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 SERPINI1Q99574 410 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 ARHGAP9Q9BRR9 750 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 CENPKQ9BS16 269 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 GATA5Q9BWX5 397 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-206ENST00000467681 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms