RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 FOSL1P15407 271 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 C21orf33P30042 268 aaPredicted RBP17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 NOGQ13253 232 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 GNA13Q14344 377 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 ZNF79Q15937 498 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 AANATQ16613 207 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 PLET1Q6UQ28 207 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 TEX261Q6UWH6 196 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 COMMD7Q86VX2 200 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 KRTCAP2Q8N6L1 136 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 ZNF548Q8NEK5 533 aaPredicted RBP17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 GPR151Q8TDV0 419 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 AKAP1Q92667 903 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 DNASE1L2Q92874 299 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 CAPNS2Q96L46 248 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 EVA1BQ9NVM1 165 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 PSORS1C1Q9UIG5 152 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 U3KQ87 197 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 IFRD1O00458 451 aaPredicted RBP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 RFPL3O75679 317 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CDK1P06493 297 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 RETP07949 1114 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 PSMA3P25788 255 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CD70P32970 193 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 BCL2L1Q07817 233 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 TATDN3Q17R31 274 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 INO80DQ53TQ3 878 aaPredicted RBP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 TMC8Q8IU68 726 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 BBS7Q8IWZ6 715 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 MARC2Q969Z3 335 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 TBC1D20Q96BZ9 403 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 WDFY2Q96P53 400 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 DCAF13Q9NV06 445 aaKnown RBP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 BACE2Q9Y5Z0 518 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 XIRP2A4UGR9 3374 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 HOXA2O43364 376 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 B3GALT4O96024 378 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CSF2P04141 144 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 ZNF7P17097 686 aaPredicted RBP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 KCNC3Q14003 757 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 VEPH1Q14D04 833 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 LEXMQ3ZCV2 418 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 DGKKQ5KSL6 1271 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 PHC2Q8IXK0 858 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 GDPD1Q8N9F7 314 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 VANGL1Q8TAA9 524 aaPredicted RBP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 COL21A1Q96P44 957 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 TBCDQ9BTW9 1192 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 TRIM45Q9H8W5 580 aaPredicted RBP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 VAPAQ9P0L0 249 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CRLS1Q9UJA2 301 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CSNK1G3Q9Y6M4 447 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 SLC35F4A4IF30 521 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 PCDHGA12O60330 932 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CKMP06732 381 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 IL1RNP18510 177 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 RPS3P23396 243 aaKnown RBP eCLIP17.35■□□□□ 0.372e-6■■■□□ 15.4
SNAPC3-205ENST00000467062 KIR2DL3P43628 341 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CREMQ03060 361 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 ARHGEF7Q14155 803 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 KIAA1324Q6UXG2 1013 aaKnown RBP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CHPFQ8IZ52 775 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 HS6ST3Q8IZP7 471 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 C9orf62Q8N4C0 152 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 ZNF680Q8NEM1 530 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 OR8K5Q8NH50 307 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 OVCA2Q8WZ82 227 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CRELD1Q96HD1 420 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 RAD9AQ99638 391 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 THUMPD3Q9BV44 507 aaKnown RBP17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 IKZF5Q9H5V7 419 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 PLCXD1Q9NUJ7 323 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 NUDT4Q9NZJ9 180 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 FAM8A1Q9UBU6 413 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 ZNF175Q9Y473 711 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 ALG5Q9Y673 324 aa17.35■□□□□ 0.37
SNAPC3-205ENST00000467062 CIB4A0PJX0 185 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 NPIPB15A6NHN6 443 aaPredicted RBP17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 TRBC1P01850 177 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 NLRP8Q86W28 1048 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 GPR26Q8NDV2 337 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 OR10Q1Q8NGQ4 319 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 OR10A6Q8NH74 314 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 PXYLP1Q8TE99 480 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 SKA2Q8WVK7 121 aaPredicted RBP17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 GPR137Q96N19 417 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 PITX2Q99697 317 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 SERHL2Q9H4I8 314 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 WWOXQ9NZC7 414 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 LOC730098B7Z3J9 87 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 SEC14L5O43304 696 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 ZNF821O75541 412 aaPredicted RBP17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 EFEMP2O95967 443 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 GABRR2P28476 465 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 CPSF6Q16630 551 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 FAM174BQ3ZCQ3 159 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 GTDC1Q4AE62 458 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 GPAT4Q86UL3 456 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms