RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PTSQ03393 145 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 SCARB2Q14108 478 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 GANABQ14697 944 aaKnown RBP12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 TBRG1Q3YBR2 411 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 ARMC4Q5T2S8 1044 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 ANXA8L1Q5VT79 327 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 PTCHD4Q6ZW05 846 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 GALNT12Q8IXK2 581 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 VPS37AQ8NEZ2 397 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 OR4K1Q8NGD4 311 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 RNF170Q96K19 258 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 TMEM246Q9BRR3 403 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 SH3BP4Q9P0V3 963 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 HCN4Q9Y3Q4 1203 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 LINC00854A0A1B0GVQ3 168 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 MEIOCA2RUB1 952 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 UGDHO60701 494 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 GASTP01350 101 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 SCG5P05408 212 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 CKMT1AP12532 417 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 IL7P13232 177 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 HMGA2P52926 109 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 AP1S2P56377 157 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 SP140Q13342 867 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 DGKKQ5KSL6 1271 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 RNF180Q86T96 592 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 THOC6Q86W42 341 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 AQP11Q8NBQ7 271 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 GPR156Q8NFN8 814 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 LYSMD1Q96S90 227 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 PIP5K1AQ99755 562 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 SRRQ9GZT4 340 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 ZNF282Q9UDV7 671 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 CLEC2DQ9UHP7 191 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 ACSL6Q9UKU0 697 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 A0A1W2PQ09 198 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 FAM227AF5H4B4 570 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 H7C4K7 107 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 SLC16A5O15375 505 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 ENTPD6O75354 484 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 MTX2O75431 263 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 RECKO95980 971 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 ITGA2P17301 1181 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 ASMTP46597 345 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 CRISP1P54107 249 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 SMAD3P84022 425 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 EEF1A2Q05639 463 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 ZNF33BQ06732 778 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 GCNT6Q5T4J0 391 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 FRMPD2BQ6IN97 320 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 RETSATQ6NUM9 610 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 TMPRSS11AQ6ZMR5 421 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 FAM217AQ8IXS0 508 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 LAS2Q8IYD9 372 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 CACTIN-AS1Q8N1I8 211 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 HJURPQ8NCD3 748 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 MAGEB10Q96LZ2 347 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 CASD1Q96PB1 797 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 DEPDC7Q96QD5 511 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 OR4K3Q96R72 315 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 SLC22A12Q96S37 553 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 MAPKAP1Q9BPZ7 522 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 MMP28Q9H239 520 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 SLC25A19Q9HC21 320 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 TIGARQ9NQ88 270 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 CLN6Q9NWW5 311 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 TMEM161AQ9NX61 479 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 RHCGQ9UBD6 479 aa12.45□□□□□ -0.42
PDZRN3-205ENST00000466780 HMX3A6NHT5 357 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 RNASET2O00584 256 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 TFECO14948 347 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 CRYBB2P43320 205 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 PTPN5P54829 565 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 PSPHP78330 225 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 PLD1Q13393 1074 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 TAB1Q15750 504 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 Q5BKY6 102 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 PRR23CQ6ZRP0 262 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 TPRG1Q6ZUI0 275 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 RASGRP3Q8IV61 690 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 ADAMTS19Q8TE59 1207 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 IL4I1Q96RQ9 567 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 SGK2Q9HBY8 427 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 C1GALT1Q9NS00 363 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 SNTG1Q9NSN8 517 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 ABCB8Q9NUT2 735 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 PAQR5Q9NXK6 330 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 CLEC4EQ9ULY5 219 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 MGAT4DA6NG13 374 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 TMEM88BA6NKF7 163 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 H0YIV9 168 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 WWP2O00308 870 aa12.44□□□□□ -0.42
PDZRN3-205ENST00000466780 GREM1O60565 184 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms