RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CHST8Q9H2A9 424 aa15.16■□□□□ 0.02
GPC1-207ENST00000466624 ZNF395Q9H8N7 513 aaPredicted RBP15.16■□□□□ 0.02
GPC1-207ENST00000466624 COPS7BQ9H9Q2 264 aaPredicted RBP15.16■□□□□ 0.02
GPC1-207ENST00000466624 PFDN4Q9NQP4 134 aa15.16■□□□□ 0.02
GPC1-207ENST00000466624 SLC22A11Q9NSA0 550 aa15.16■□□□□ 0.02
GPC1-207ENST00000466624 ADAM29Q9UKF5 820 aa15.16■□□□□ 0.02
GPC1-207ENST00000466624 SLC12A4Q9UP95 1085 aa15.16■□□□□ 0.02
GPC1-207ENST00000466624 C1QTNF9BB2RNN3 333 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 TMEM233B4DJY2 109 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 SLC28A1O00337 649 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 TERTO14746 1132 aaKnown RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 RSL1D1O76021 490 aaKnown RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 C1QTNF9P0C862 333 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 IL10P22301 178 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 HIST1H1TP22492 207 aaPredicted RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 OR1D4P47884 311 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 HK2P52789 917 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 BTN3A2P78410 334 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 CLN3Q13286 438 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 AP5B1Q2VPB7 878 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 FAM219BQ5XKK7 198 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 OVCH1Q7RTY7 1134 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 PAGE2Q7Z2X7 111 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 NUDT13Q86X67 352 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 ZCCHC7Q8N3Z6 543 aaKnown RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 METTL27Q8N6F8 245 aaPredicted RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 IL22RA1Q8N6P7 574 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 AGR3Q8TD06 166 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 KCNE4Q8WWG9 221 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 COL26A1Q96A83 441 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 RNF31Q96EP0 1072 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 HBEGFQ99075 208 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 EFHD1Q9BUP0 239 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 GPR87Q9BY21 358 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 ZNF717Q9BY31 904 aaPredicted RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 TGIF2Q9GZN2 237 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 TUBB1Q9H4B7 451 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 DDX31Q9H8H2 851 aaKnown RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 WDR54Q9H977 334 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 AKIRIN1Q9H9L7 192 aaPredicted RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 MKKSQ9NPJ1 570 aaPredicted RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 SIRT5Q9NXA8 310 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 IFT80Q9P2H3 777 aaPredicted RBP15.15■□□□□ 0.02
GPC1-207ENST00000466624 FIS1Q9Y3D6 152 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 CCL27Q9Y4X3 112 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 PCDHGA6Q9Y5G7 932 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 MAU2Q9Y6X3 613 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 CCDC88CQ9P219 2028 aa15.15■□□□□ 0.02
GPC1-207ENST00000466624 APC2O95996 2303 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 ACACAQ13085 2346 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 SLCO1B7G3V0H7 640 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 SGK494L7N484 410 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 SAP18O00422 153 aaKnown RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 RGS14O43566 566 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 B3GALT2O43825 422 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 SH3BGRLO75368 114 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 RDH16O75452 317 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 TCN2P20062 427 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 ATP5A1P25705 553 aaKnown RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 BSGP35613 385 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 SSR2P43308 183 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 TBL3Q12788 808 aaKnown RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 NCF4Q15080 339 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 IMPG1Q17R60 797 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 SPIN4Q56A73 249 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 XKR7Q5GH72 579 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 LCN10Q6JVE6 187 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 FAM199XQ6PEV8 388 aaPredicted RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 ZNF793Q6ZN11 406 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 MED25Q71SY5 747 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 ACOT4Q8N9L9 421 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 ADAMTS18Q8TE60 1221 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 CT55Q8WUE5 264 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 CHTF18Q8WVB6 975 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 KIAA1143Q96AT1 154 aaPredicted RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 OR1F2PQ96R84 312 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 CCDC134Q9H6E4 229 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 C14orf105Q9NVL8 296 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 ZNF282Q9UDV7 671 aaPredicted RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 GPN3Q9UHW5 284 aaPredicted RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 KCND3Q9UK17 655 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 CROTQ9UKG9 612 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 NXT1Q9UKK6 140 aaKnown RBP15.14■□□□□ 0.01
GPC1-207ENST00000466624 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
GPC1-207ENST00000466624 A0A0G2JN53 185 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 LOC101059948A0A1B0GTJ6 334 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 VSTM2BA6NLU5 285 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 RTCAO00442 366 aaKnown RBP15.13■□□□□ 0.01
GPC1-207ENST00000466624 PIP5K1BO14986 540 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 B3GALT4O96024 378 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 CERS1P27544 350 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 DLSTP36957 453 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 EIF2S3P41091 472 aaKnown RBP15.13■□□□□ 0.01
GPC1-207ENST00000466624 HMGCS1Q01581 520 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 DNASE1L3Q13609 305 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 TGIF1Q15583 401 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 GALNT18Q6P9A2 607 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 SCIMPQ6UWF3 145 aa15.13■□□□□ 0.01
GPC1-207ENST00000466624 Q6ZSR9 355 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms