RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 SSTR1P30872 391 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 CLCN2P51788 898 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 PLA2G16P53816 162 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 TGFBIQ15582 683 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 XKR6Q5GH73 641 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 PAGE2BQ5JRK9 111 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 SP5Q6BEB4 398 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-206ENST00000466591 CCDC25Q86WR0 208 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 LURAP1LQ8IV03 231 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 CEP97Q8IW35 865 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 CA13Q8N1Q1 262 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 SPATA6LQ8N4H0 392 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 TMEM156Q8N614 296 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 MDS2Q8NDY4 140 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 ADAMTS18Q8TE60 1221 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 THAP3Q8WTV1 239 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-206ENST00000466591 ANKRD49Q8WVL7 239 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 RHBDF1Q96CC6 855 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 CCDC120Q96HB5 630 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 GPR137Q96N19 417 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 CPNE1Q99829 537 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 CAB39LQ9H9S4 337 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 PRTFDC1Q9NRG1 225 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 GPRC5BQ9NZH0 403 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 RNF112Q9ULX5 631 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 UTP11Q9Y3A2 253 aaKnown RBP16.42■□□□□ 0.22
COL7A1-206ENST00000466591 MMACHCQ9Y4U1 282 aa16.42■□□□□ 0.22
COL7A1-206ENST00000466591 FAM187AA6NFU0 413 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 PHGDHO43175 533 aaKnown RBP16.41■□□□□ 0.22
COL7A1-206ENST00000466591 MAN1A2O60476 641 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 CCNT2O60583 730 aaKnown RBP16.41■□□□□ 0.22
COL7A1-206ENST00000466591 DNAJB6O75190 326 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 PIAS1O75925 651 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 ATP6V0D1P61421 351 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 SLMAPQ14BN4 828 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 PDK4Q16654 411 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 C18orf21Q32NC0 220 aaPredicted RBP16.41■□□□□ 0.22
COL7A1-206ENST00000466591 SRRM1Q8IYB3 904 aaKnown RBP16.41■□□□□ 0.22
COL7A1-206ENST00000466591 EID3Q8N140 333 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 ZNF808Q8N4W9 903 aaPredicted RBP16.41■□□□□ 0.22
COL7A1-206ENST00000466591 ELP5Q8TE02 316 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 PDLIM2Q96JY6 352 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 ERP44Q9BS26 406 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 REXO4Q9GZR2 422 aaKnown RBP16.41■□□□□ 0.22
COL7A1-206ENST00000466591 WHRNQ9P202 907 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 MTO1Q9Y2Z2 717 aaKnown RBP16.41■□□□□ 0.22
COL7A1-206ENST00000466591 SPACA6W5XKT8 324 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 CROCCQ5TZA2 2017 aa16.41■□□□□ 0.22
COL7A1-206ENST00000466591 ZGRF1Q86YA3 2104 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 DOPEY1Q5JWR5 2465 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 SCN2AQ99250 2005 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 TCRBV16S1A1N1A0A5B0 115 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 E7ESA3 106 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 CDK2AP1O14519 115 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 TFECO14948 347 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-206ENST00000466591 EIF3HO15372 352 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL7A1-206ENST00000466591 CASQ1P31415 396 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 GP5P40197 560 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 HSPA7P48741 367 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 ART3Q13508 389 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 BMPR2Q13873 1038 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 SULT1C3Q6IMI6 304 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 SLCO4C1Q6ZQN7 724 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 C3orf62Q6ZUJ4 267 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 KLHDC8AQ8IYD2 350 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 GHDCQ8N2G8 530 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 FAM47BQ8NA70 645 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 B3GNT7Q8NFL0 401 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 CREB3L4Q8TEY5 395 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 SCMH1Q96GD3 660 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 SEC16BQ96JE7 1060 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 NPLQ9BXD5 320 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-206ENST00000466591 PITHD1Q9GZP4 211 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-206ENST00000466591 RAB17Q9H0T7 212 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 CHST11Q9NPF2 352 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 NECTIN3Q9NQS3 549 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 TINAGQ9UJW2 476 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 ERVK-11Q9UQG0 969 aa16.4■□□□□ 0.22
COL7A1-206ENST00000466591 KLF13Q9Y2Y9 288 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-206ENST00000466591 LRIT2A6NDA9 550 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 SYNDIG1LA6NDD5 238 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 SUPT3HB4E1H0 165 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 KLRC4-KLRK1H3BQV0 150 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 SUPT3HO75486 399 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 CLEC3AO75596 197 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 STK16O75716 305 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 TNNI3P19429 210 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 SPRP35270 261 aaPredicted RBP16.39■□□□□ 0.21
COL7A1-206ENST00000466591 SLC6A12P48065 614 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 RAB38P57729 211 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 MLF1P58340 268 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 RAB10P61026 200 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 IRF8Q02556 426 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 C2orf54Q08AI8 447 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 STX4Q12846 297 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 LAPTM5Q13571 262 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 C3AR1Q16581 482 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 FBXO48Q5FWF7 155 aa16.39■□□□□ 0.21
COL7A1-206ENST00000466591 TBC1D1Q86TI0 1168 aaPredicted RBP16.39■□□□□ 0.21
COL7A1-206ENST00000466591 CYP4Z2PQ8N1L4 340 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms