RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 PRAMEF14Q5SWL7 426 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 PRAMEF13Q5VWM6 474 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 Q6ZNX1 250 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 DCDC5Q6ZRR9 648 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.66■□□□□ 0.1
SLX4-202ENST00000466154 CACTIN-AS1Q8N1I8 211 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 OR8D1Q8WZ84 308 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 MACROD1Q9BQ69 325 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 C11orf49Q9H6J7 331 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 TRNAU1APQ9NX07 287 aaKnown RBP15.66■□□□□ 0.1
SLX4-202ENST00000466154 DEC1Q9P2X7 70 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 PCDHGA6Q9Y5G7 932 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 LYVE1Q9Y5Y7 322 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 EYSQ5T1H1 3165 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 C5orf58C9J3I9 102 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 H7BY64 318 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 ATP6V1G1O75348 118 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 WBP4O75554 376 aaKnown RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 SOD1P00441 154 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 DBTP11182 482 aaKnown RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 IL1RNP18510 177 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 MAGP20916 626 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 KEAP1Q14145 624 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 SOWAHCQ53LP3 525 aaPredicted RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 ZC3H12BQ5HYM0 836 aaKnown RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 NXPE4Q6UWF7 544 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 OLIG3Q7RTU3 272 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 ANKRD13BQ86YJ7 626 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 STX19Q8N4C7 294 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 ZHX1-C8orf76Q96EF9 292 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 SH3YL1Q96HL8 342 aaPredicted RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 PRAP1Q96NZ9 151 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 ZBTB20Q9HC78 741 aaPredicted RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 CUEDC1Q9NWM3 386 aaPredicted RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 DUSP12Q9UNI6 340 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 CORO2BQ9UQ03 480 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 REV3LO60673 3130 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 PRAMEF33A0A0G2JMD5 474 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 TTC36A6NLP5 189 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 PRAMEF10O60809 474 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 BCHEP06276 602 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 INHBBP09529 407 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 FURINP09958 794 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 ADRB3P13945 408 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 HSD3B1P14060 373 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 HSD3B2P26439 372 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 MANFP55145 182 aaKnown RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 DNASE1L3Q13609 305 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 INAQ16352 499 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 FAM124AQ86V42 546 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 CLIP4Q8N3C7 705 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 PHF10Q8WUB8 498 aaKnown RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 VPS35Q96QK1 796 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 HHIPQ96QV1 700 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 EFCAB11Q9BUY7 163 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 C6orf62Q9GZU0 229 aaPredicted RBP15.65■□□□□ 0.1
SLX4-202ENST00000466154 FAIMQ9NVQ4 179 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 CCDC88CQ9P219 2028 aa15.65■□□□□ 0.1
SLX4-202ENST00000466154 WASHC1A8K0Z3 465 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 CLDN25C9JDP6 229 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 RNASET2O00584 256 aaKnown RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 FUCA1P04066 466 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 ALPPL2P10696 532 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 PPIBP23284 216 aaKnown RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 PCGF2P35227 344 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 CTSKP43235 329 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 TP53BP2Q13625 1128 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 TEAD4Q15561 434 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 PRSS36Q5K4E3 855 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 TRIM40Q6P9F5 258 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 WASH2PQ6VEQ5 465 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 LSRQ86X29 649 aaPredicted RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 SVOPQ8N4V2 548 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 CXorf40AQ8TE69 158 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 SMG7Q92540 1137 aaKnown RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 TFGQ92734 400 aaPredicted RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 CNDP2Q96KP4 475 aaKnown RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 CTPS2Q9NRF8 586 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 TAS2R9Q9NYW1 312 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 SLC23A2Q9UGH3 650 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 PCM1Q15154 2024 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 GLOD5A6NK44 160 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 ADAMDEC1O15204 470 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 SOX14O95416 240 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 STSP08842 583 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 LINC00271P0C7V0 271 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 FEN1P39748 380 aaKnown RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 MAGEA10P43363 369 aaPredicted RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 PRKAG1P54619 331 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 CEACAM20Q6UY09 585 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 ZNF557Q8N988 423 aaPredicted RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 BADQ92934 168 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 COQ8BQ96D53 544 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 C11orf24Q96F05 449 aaPredicted RBP15.64■□□□□ 0.09
SLX4-202ENST00000466154 FCRL1Q96LA6 429 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 DUSP21Q9H596 190 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 XKR8Q9H6D3 395 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 RNF167Q9H6Y7 350 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 OR1A2Q9Y585 309 aa15.64■□□□□ 0.09
SLX4-202ENST00000466154 SNX11Q9Y5W9 270 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms