RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 C1orf109Q9NX04 203 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 LUZP4Q9P127 313 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 TAAR2Q9P1P5 351 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 FAM8A1Q9UBU6 413 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 SLC22A14Q9Y267 594 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 RNF11Q9Y3C5 154 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 CCL27Q9Y4X3 112 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 KCNE1BA0A087WTH5 132 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 C15orf38-AP3S2A0A0A6YYH1 394 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 A0A1W2PP18 115 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 WIPF3A6NGB9 483 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 A8MU76 341 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 H0YIV9 168 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 MKRN2OSH3BPM6 223 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 ENTPD5O75356 428 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 STK17BO94768 372 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 DLGAP3O95886 979 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 SLC35G4P0C7Q5 338 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 PRPS2P11908 318 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 ACADLP28330 430 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 PDHA2P29803 388 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 STAT5AP42229 794 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 HALP42357 657 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 BDKRB1P46663 353 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 HTR6P50406 440 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 PSME3P61289 254 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 CHIT1Q13231 466 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 TRA2AQ13595 282 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC6-215ENST00000465457 E2F2Q14209 437 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 PAGE2BQ5JRK9 111 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 SAMD4BQ5PRF9 694 aaKnown RBP13.22□□□□□ -0.29
HDAC6-215ENST00000465457 METRNLQ641Q3 311 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 SLC30A9Q6PML9 568 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 PAOXQ6QHF9 649 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 RIPOR1Q6ZS17 1223 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 ARPINQ7Z6K5 226 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 SELENOMQ8WWX9 145 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 SPDL1Q96EA4 605 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 ANKRD27Q96NW4 1050 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 EFCAB11Q9BUY7 163 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 CARS2Q9HA77 564 aaKnown RBP13.22□□□□□ -0.29
HDAC6-215ENST00000465457 BRF2Q9HAW0 419 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 LRTM1Q9HBL6 345 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 STOML1Q9UBI4 398 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 ERRFI1Q9UJM3 462 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-215ENST00000465457 LEF1Q9UJU2 399 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-215ENST00000465457 CROTQ9UKG9 612 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 SLC17A4Q9Y2C5 497 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 DYRK1BQ9Y463 629 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 PCDHGA11Q9Y5H2 935 aa13.22□□□□□ -0.29
HDAC6-215ENST00000465457 DIDO1Q9BTC0 2240 aaKnown RBP13.22□□□□□ -0.29
HDAC6-215ENST00000465457 PDZD2O15018 2839 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 CCDC154A6NI56 674 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 FBP2O00757 339 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 FFAR3O14843 346 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 GPR42O15529 346 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 KDM1AO60341 852 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 EEDO75530 441 aaKnown RBP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 PSMG1O95456 288 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 SLC16A8O95907 504 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 ZNF28P17035 718 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 ME2P23368 584 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 ELAVL4P26378 380 aaKnown RBP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 POLR2JP52435 117 aaKnown RBP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 DIO3P55073 304 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 RAB15P59190 212 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 AP2B1P63010 937 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 CTBSQ01459 385 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 ABHD18Q0P651 414 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 NAE1Q13564 534 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 LAPTM5Q13571 262 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 ERV3-1Q14264 604 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 NFE2L1Q14494 772 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 CPSF6Q16630 551 aaKnown RBP eCLIP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 XKR6Q5GH73 641 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 PIGGQ5H8A4 983 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 TCHHL1Q5QJ38 904 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 DOK6Q6PKX4 331 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 CYP20A1Q6UW02 462 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 FUNDC1Q8IVP5 155 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 SYTL1Q8IYJ3 562 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 DNAJB8Q8NHS0 232 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 UBE2E3Q969T4 207 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 WDR34Q96EX3 536 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 CMTM7Q96FZ5 175 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 NPAS2Q99743 824 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 HAUS8Q9BT25 410 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 SGPP1Q9BX95 441 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 RAB11FIP5Q9BXF6 653 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 PCBD2Q9H0N5 130 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 ATG10Q9H0Y0 220 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 TRIT1Q9H3H1 467 aaKnown RBP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 CCDC177Q9NQR7 707 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 CUEDC1Q9NWM3 386 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 NMRK1Q9NWW6 199 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.29
HDAC6-215ENST00000465457 SUCOQ9UBS9 1254 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms