RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ARF3P61204 181 aaPredicted RBP16.57■□□□□ 0.24
CPSF4-209ENST00000465132 YBX1P67809 324 aaKnown RBP16.57■□□□□ 0.24
CPSF4-209ENST00000465132 MEF2AQ02078 507 aaPredicted RBP16.57■□□□□ 0.24
CPSF4-209ENST00000465132 ZRSR2Q15696 482 aaKnown RBP16.57■□□□□ 0.24
CPSF4-209ENST00000465132 MUM1Q2TAK8 710 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 NADK2Q4G0N4 442 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 TMEM35AQ53FP2 167 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 ARL13AQ5H913 290 aaPredicted RBP16.57■□□□□ 0.24
CPSF4-209ENST00000465132 WASHC2DQ5SRD0 308 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 ABHD13Q7L211 337 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 CUZD1Q86UP6 607 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 CLYBLQ8N0X4 340 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 EFCAB3Q8N7B9 438 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 GBP7Q8N8V2 638 aaPredicted RBP16.57■□□□□ 0.24
CPSF4-209ENST00000465132 OR7G3Q8NG95 312 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 NT5CQ8TCD5 201 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 CPT1CQ8TCG5 803 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 AGAP11Q8TF27 550 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 MVB12AQ96EY5 273 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 CMTM7Q96FZ5 175 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 FAR2Q96K12 515 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 ZNF285Q96NJ3 590 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 C17orf62Q9BQA9 187 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 DPH2Q9BQC3 489 aaPredicted RBP16.57■□□□□ 0.24
CPSF4-209ENST00000465132 ROGDIQ9GZN7 287 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 CHST8Q9H2A9 424 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 AHSPQ9NZD4 102 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 RNF11Q9Y3C5 154 aa16.57■□□□□ 0.24
CPSF4-209ENST00000465132 USP9XQ93008 2570 aaPredicted RBP16.57■□□□□ 0.24
CPSF4-209ENST00000465132 FITM1A5D6W6 292 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 SLCO1B7G3V0H7 640 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 MEN1O00255 615 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 AZIN1O14977 448 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 NDUFS4O43181 175 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 SERPIND1P05546 499 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 FGF4P08620 206 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 CD63P08962 238 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 BGNP21810 368 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 GNLYP22749 145 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 BCL6P41182 706 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 GABRA4P48169 554 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 HERC3Q15034 1050 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 PRAMEF17Q5VTA0 474 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 LCN10Q6JVE6 187 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 CDYL2Q8N8U2 506 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 OR6Y1Q8NGX8 325 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 ADAMTS17Q8TE56 1095 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 TM4SF19Q96DZ7 209 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 SERPINI1Q99574 410 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 BRF2Q9HAW0 419 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 CLK4Q9HAZ1 481 aaKnown RBP16.56■□□□□ 0.24
CPSF4-209ENST00000465132 RAP2CQ9Y3L5 183 aa16.56■□□□□ 0.24
CPSF4-209ENST00000465132 HYKKA2RU49 373 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 CEACAM4O75871 244 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 SORBS2O94875 1100 aaKnown RBP16.55■□□□□ 0.24
CPSF4-209ENST00000465132 OR4F21O95013 312 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 CAPN1P07384 714 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 RAB40ALP0C0E4 278 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 AVPR1BP47901 424 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 CSTF3Q12996 717 aaKnown RBP16.55■□□□□ 0.24
CPSF4-209ENST00000465132 FAM53BQ14153 422 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 DEFB110Q30KQ9 67 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 TUBB8Q3ZCM7 444 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 FRMPD2BQ6IN97 320 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 PRMT9Q6P2P2 845 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 ZCCHC23Q6ZST2 131 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 PLD3Q8IV08 490 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 DSELQ8IZU8 1212 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 ENDOVQ8N8Q3 282 aaKnown RBP16.55■□□□□ 0.24
CPSF4-209ENST00000465132 OR1L3Q8NH93 324 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 PROKR1Q8TCW9 393 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 SELENOMQ8WWX9 145 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 CLIP3Q96DZ5 547 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 MAGEB18Q96M61 343 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 CDK15Q96Q40 435 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 ACTR5Q9H9F9 607 aaPredicted RBP16.55■□□□□ 0.24
CPSF4-209ENST00000465132 ZNF490Q9ULM2 529 aaPredicted RBP16.55■□□□□ 0.24
CPSF4-209ENST00000465132 MAP4K5Q9Y4K4 846 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 SLC22A7Q9Y694 548 aa16.55■□□□□ 0.24
CPSF4-209ENST00000465132 LCMT2O60294 686 aaKnown RBP16.54■□□□□ 0.24
CPSF4-209ENST00000465132 AGFG2O95081 481 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 TSPAN8P19075 237 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 AGXTP21549 392 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 RORAP35398 523 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 TSFMP43897 325 aaKnown RBP16.54■□□□□ 0.24
CPSF4-209ENST00000465132 RPL14P50914 215 aaKnown RBP16.54■□□□□ 0.24
CPSF4-209ENST00000465132 CUL3Q13618 768 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 C4orf17Q53FE4 359 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 FHL5Q5TD97 284 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 LETMD1Q6P1Q0 360 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 TRIM40Q6P9F5 258 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 RNF165Q6ZSG1 346 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 CRLF3Q8IUI8 442 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 LURAP1LQ8IV03 231 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.54■□□□□ 0.24
CPSF4-209ENST00000465132 ZNF740Q8NDX6 193 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 ZNF75CPQ92670 426 aaPredicted RBP16.54■□□□□ 0.24
CPSF4-209ENST00000465132 QRFPRQ96P65 431 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 ANKHQ9HCJ1 492 aa16.54■□□□□ 0.24
CPSF4-209ENST00000465132 TCFL5Q9UL49 500 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms