RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 GPSM1Q86YR5 675 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 CEP97Q8IW35 865 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 MCEMP1Q8IX19 187 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 CTAGE3PQ8IX95 158 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 ZNF808Q8N4W9 903 aaPredicted RBP12.95□□□□□ -0.34
RPP40-203ENST00000464646 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 MDS2Q8NDY4 140 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 TTLQ8NG68 377 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 ANKRD49Q8WVL7 239 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 ITLN2Q8WWU7 325 aaPredicted RBP12.95□□□□□ -0.34
RPP40-203ENST00000464646 ESAMQ96AP7 390 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 TSPAN17Q96FV3 270 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 PDLIM2Q96JY6 352 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 GPR137Q96N19 417 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 CCDC77Q9BR77 488 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 SARGQ9BW04 601 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 SLC6A16Q9GZN6 736 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 RHOJQ9H4E5 214 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 MRPS33Q9Y291 106 aaKnown RBP12.95□□□□□ -0.34
RPP40-203ENST00000464646 GTF3C1Q12789 2109 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 TFECO14948 347 aaPredicted RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 CCNT2O60583 730 aaKnown RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 SH3BGRLO75368 114 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 CCDC166P0CW27 439 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 COX6B1P14854 86 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 ZNF24P17028 368 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 TNNI3P19429 210 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 GRNP28799 593 aaKnown RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 SSTR1P30872 391 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 RFC3P40938 356 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 HSPA7P48741 367 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 CLCN2P51788 898 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 CDKL1Q00532 357 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 HSF1Q00613 529 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 ART3Q13508 389 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 BMPR2Q13873 1038 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 HIST2H2ACQ16777 129 aaPredicted RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 PPP1R3AQ16821 1122 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 XKR6Q5GH73 641 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 ZNF468Q5VIY5 522 aaPredicted RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 HIST2H2AA3Q6FI13 130 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 TRIM40Q6P9F5 258 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 RPTNQ6XPR3 784 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 RAPH1Q70E73 1250 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 CCDC25Q86WR0 208 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 SPPL2CQ8IUH8 684 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 KLHDC8AQ8IYD2 350 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 GHDCQ8N2G8 530 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 CPSF7Q8N684 471 aaKnown RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 ELP5Q8TE02 316 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 GAL3ST3Q96A11 431 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 RHBDF1Q96CC6 855 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 SCMH1Q96GD3 660 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 CAPS2Q9BXY5 557 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 CNOT10Q9H9A5 744 aaKnown RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 DNAJC11Q9NVH1 559 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 ERVK-11Q9UQG0 969 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 MTO1Q9Y2Z2 717 aaKnown RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 UTP20O75691 2785 aaKnown RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 PRRC2CQ9Y520 2896 aaKnown RBP12.94□□□□□ -0.34
RPP40-203ENST00000464646 NOTCH2Q04721 2471 aa12.94□□□□□ -0.34
RPP40-203ENST00000464646 ASNA1O43681 348 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 PCNAP12004 261 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 STMN1P16949 149 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 TNFRSF8P28908 595 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 HPDP32754 393 aaPredicted RBP12.93□□□□□ -0.34
RPP40-203ENST00000464646 MEOX1P50221 254 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 RAB38P57729 211 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 MLF1P58340 268 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 POU4F1Q01851 419 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 TGM3Q08188 693 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 C2orf54Q08AI8 447 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 RUNX2Q13950 521 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 SLMAPQ14BN4 828 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 TGFBIQ15582 683 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 C3P1Q6ZMU1 363 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 TCAIMQ8N3R3 496 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 B3GNT7Q8NFL0 401 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 CREB3L4Q8TEY5 395 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 FRMD6Q96NE9 622 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 REXO4Q9GZR2 422 aaKnown RBP12.93□□□□□ -0.34
RPP40-203ENST00000464646 CLK4Q9HAZ1 481 aaKnown RBP12.93□□□□□ -0.34
RPP40-203ENST00000464646 MOCS1Q9NZB8 636 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 RNF112Q9ULX5 631 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 MMACHCQ9Y4U1 282 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 PCDHGB6Q9Y5F9 930 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 CREBBPQ92793 2442 aa12.93□□□□□ -0.34
RPP40-203ENST00000464646 TCRBV16S1A1N1A0A5B0 115 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 C4orf51C9J302 202 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 KLRC4-KLRK1H3BQV0 150 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 PRRG2O14669 202 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 STK16O75716 305 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 NEURL1O76050 574 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 GPR85P60893 370 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 PLGLB1Q02325 96 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 STX4Q12846 297 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 RCN2Q14257 317 aa12.92□□□□□ -0.34
RPP40-203ENST00000464646 FRG1Q14331 258 aaKnown RBP12.92□□□□□ -0.34
RPP40-203ENST00000464646 DOPEY1Q5JWR5 2465 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms