RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SLC25A46Q96AG3 418 aa7□□□□□ -1.29
USP48-206ENST00000464577 PLD4Q96BZ4 506 aa7□□□□□ -1.29
USP48-206ENST00000464577 CXorf40BQ96DE9 158 aa7□□□□□ -1.29
USP48-206ENST00000464577 C11orf24Q96F05 449 aaPredicted RBP7□□□□□ -1.29
USP48-206ENST00000464577 SAMD11Q96NU1 681 aa7□□□□□ -1.29
USP48-206ENST00000464577 FYTTD1Q96QD9 318 aaKnown RBP7□□□□□ -1.29
USP48-206ENST00000464577 ADAM2Q99965 735 aa7□□□□□ -1.29
USP48-206ENST00000464577 ARHGAP39Q9C0H5 1083 aa7□□□□□ -1.29
USP48-206ENST00000464577 C11orf54Q9H0W9 315 aaPredicted RBP7□□□□□ -1.29
USP48-206ENST00000464577 SYNDIG1Q9H7V2 258 aa7□□□□□ -1.29
USP48-206ENST00000464577 ZFYVE1Q9HBF4 777 aa7□□□□□ -1.29
USP48-206ENST00000464577 TIGARQ9NQ88 270 aa7□□□□□ -1.29
USP48-206ENST00000464577 SPATA6Q9NWH7 488 aaPredicted RBP7□□□□□ -1.29
USP48-206ENST00000464577 STMN3Q9NZ72 180 aa7□□□□□ -1.29
USP48-206ENST00000464577 VPS29Q9UBQ0 182 aa7□□□□□ -1.29
USP48-206ENST00000464577 SSR3Q9UNL2 185 aa7□□□□□ -1.29
USP48-206ENST00000464577 A0A0B4J293 547 aa7□□□□□ -1.29
USP48-206ENST00000464577 PRAMEF25A6NGN4 478 aa7□□□□□ -1.29
USP48-206ENST00000464577 H3BM21 787 aa7□□□□□ -1.29
USP48-206ENST00000464577 M0R129 80 aa7□□□□□ -1.29
USP48-206ENST00000464577 RNASET2O00584 256 aaKnown RBP7□□□□□ -1.29
USP48-206ENST00000464577 TFECO14948 347 aaPredicted RBP7□□□□□ -1.29
USP48-206ENST00000464577 PROM1O43490 865 aa7□□□□□ -1.29
USP48-206ENST00000464577 TPST2O60704 377 aa7□□□□□ -1.29
USP48-206ENST00000464577 HCN1O60741 890 aa7□□□□□ -1.29
USP48-206ENST00000464577 PRAMEF4O60810 478 aa7□□□□□ -1.29
USP48-206ENST00000464577 CSO75390 466 aaKnown RBP7□□□□□ -1.29
USP48-206ENST00000464577 IFNA14P01570 189 aa7□□□□□ -1.29
USP48-206ENST00000464577 HLA-DQB1P01920 261 aa7□□□□□ -1.29
USP48-206ENST00000464577 C1QBP02746 253 aa7□□□□□ -1.29
USP48-206ENST00000464577 CYP17A1P05093 508 aa7□□□□□ -1.29
USP48-206ENST00000464577 HIST1H2AGP0C0S8 130 aaPredicted RBP7□□□□□ -1.29
USP48-206ENST00000464577 BPIP17213 487 aa7□□□□□ -1.29
USP48-206ENST00000464577 HIST1H2ADP20671 130 aa7□□□□□ -1.29
USP48-206ENST00000464577 CNR2P34972 360 aa7□□□□□ -1.29
USP48-206ENST00000464577 ATP5C1P36542 298 aaKnown RBP7□□□□□ -1.29
USP48-206ENST00000464577 SPAM1P38567 509 aa7□□□□□ -1.29
USP48-206ENST00000464577 HTR2BP41595 481 aa7□□□□□ -1.29
USP48-206ENST00000464577 IL12RB1P42701 662 aa7□□□□□ -1.29
USP48-206ENST00000464577 NSG1P42857 185 aa7□□□□□ -1.29
USP48-206ENST00000464577 MVDP53602 400 aa7□□□□□ -1.29
USP48-206ENST00000464577 RHOAP61586 193 aa7□□□□□ -1.29
USP48-206ENST00000464577 ACSM2AQ08AH3 577 aa7□□□□□ -1.29
USP48-206ENST00000464577 MRPL58Q14197 206 aaKnown RBP7□□□□□ -1.29
USP48-206ENST00000464577 SPHARQ15513 63 aa7□□□□□ -1.29
USP48-206ENST00000464577 TAB1Q15750 504 aa7□□□□□ -1.29
USP48-206ENST00000464577 CHRNA6Q15825 494 aa7□□□□□ -1.29
USP48-206ENST00000464577 CDKN3Q16667 212 aa7□□□□□ -1.29
USP48-206ENST00000464577 PTCHD3Q3KNS1 767 aa7□□□□□ -1.29
USP48-206ENST00000464577 CEP78Q5JTW2 689 aa7□□□□□ -1.29
USP48-206ENST00000464577 PRAMEF9Q5VWM5 478 aa7□□□□□ -1.29
USP48-206ENST00000464577 ACSM2BQ68CK6 577 aa7□□□□□ -1.29
USP48-206ENST00000464577 FRMPD2BQ6IN97 320 aa7□□□□□ -1.29
USP48-206ENST00000464577 FAM131AQ6UXB0 335 aa7□□□□□ -1.29
USP48-206ENST00000464577 NAGSQ8N159 534 aa7□□□□□ -1.29
USP48-206ENST00000464577 CADM2Q8N3J6 435 aa7□□□□□ -1.29
USP48-206ENST00000464577 PROKR2Q8NFJ6 384 aa7□□□□□ -1.29
USP48-206ENST00000464577 OR52J3Q8NH60 311 aa7□□□□□ -1.29
USP48-206ENST00000464577 GOT1L1Q8NHS2 421 aaPredicted RBP7□□□□□ -1.29
USP48-206ENST00000464577 KLHL6Q8WZ60 621 aa7□□□□□ -1.29
USP48-206ENST00000464577 MAL2Q969L2 176 aa7□□□□□ -1.29
USP48-206ENST00000464577 MARVELD3Q96A59 401 aa7□□□□□ -1.29
USP48-206ENST00000464577 RNF31Q96EP0 1072 aa7□□□□□ -1.29
USP48-206ENST00000464577 TMEM80Q96HE8 168 aa7□□□□□ -1.29
USP48-206ENST00000464577 HIST1H2AHQ96KK5 128 aa7□□□□□ -1.29
USP48-206ENST00000464577 HIST1H2AJQ99878 128 aa7□□□□□ -1.29
USP48-206ENST00000464577 H2AFJQ9BTM1 129 aa7□□□□□ -1.29
USP48-206ENST00000464577 MED18Q9BUE0 208 aa7□□□□□ -1.29
USP48-206ENST00000464577 MKRN2Q9H000 416 aaKnown RBP7□□□□□ -1.29
USP48-206ENST00000464577 ABCG8Q9H221 673 aa7□□□□□ -1.29
USP48-206ENST00000464577 MIXL1Q9H2W2 232 aa7□□□□□ -1.29
USP48-206ENST00000464577 FAM83DQ9H4H8 585 aa7□□□□□ -1.29
USP48-206ENST00000464577 TMEM38AQ9H6F2 299 aa7□□□□□ -1.29
USP48-206ENST00000464577 SNTG1Q9NSN8 517 aa7□□□□□ -1.29
USP48-206ENST00000464577 ACER3Q9NUN7 267 aa7□□□□□ -1.29
USP48-206ENST00000464577 GIMAP4Q9NUV9 329 aa7□□□□□ -1.29
USP48-206ENST00000464577 SLC6A14Q9UN76 642 aa7□□□□□ -1.29
USP48-206ENST00000464577 GABRQQ9UN88 632 aa7□□□□□ -1.29
USP48-206ENST00000464577 ENPP4Q9Y6X5 453 aa7□□□□□ -1.29
USP48-206ENST00000464577 GOLGB1Q14789 3259 aaKnown RBP7□□□□□ -1.29
USP48-206ENST00000464577 LOC105371267A0A1B0GV96 52 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 MTMR11A4FU01 709 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 TLR4O00206 839 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 POLR1CO15160 346 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 PCDH7O60245 1069 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ENTPD6O75354 484 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ADAP00813 363 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 SRPRAP08240 638 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 C1SP09871 688 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 IDSP22304 550 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 SOX3P41225 446 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 OR3A3P47888 321 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 SGSHP51688 502 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 AP1S2P56377 157 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 NKX3-2P78367 333 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ZXDBP98169 803 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 EEF1A2Q05639 463 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 SMARCB1Q12824 385 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 CHIT1Q13231 466 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 KCNC3Q14003 757 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms