RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 GLTPD2A6NH11 291 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 ACOD1A6NK06 481 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 LMO7DNF2Z398 122 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 PSMA7O14818 248 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 SIGLEC5O15389 551 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 GRAP2O75791 330 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 FCGR2BP31994 310 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-205ENST00000464541 FCGR2CP31995 323 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 ABCE1P61221 599 aaKnown RBP4.78□□□□□ -1.64
PTCD3-205ENST00000464541 SRPXP78539 464 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 CNTN1Q12860 1018 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 ABRQ12979 859 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 MAPK11Q15759 364 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 MLF2Q15773 248 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-205ENST00000464541 ZRANB3Q5FWF4 1079 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 PLPP4Q5VZY2 271 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 CNPY4Q8N129 248 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 NHLRC2Q8NBF2 726 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 PDLIM5Q96HC4 596 aaKnown RBP4.78□□□□□ -1.64
PTCD3-205ENST00000464541 CCDC114Q96M63 670 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 PARK7Q99497 189 aaKnown RBP4.78□□□□□ -1.64
PTCD3-205ENST00000464541 C17orf62Q9BQA9 187 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 OCR1Q9BZK8 76 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 VIPAS39Q9H9C1 493 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 GNB4Q9HAV0 340 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 C3orf14Q9HBI5 128 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 SLC7A10Q9NS82 523 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 TMOD3Q9NYL9 352 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 LEF1Q9UJU2 399 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-205ENST00000464541 PILRAQ9UKJ1 303 aa4.78□□□□□ -1.64
PTCD3-205ENST00000464541 NOL7Q9UMY1 257 aaKnown RBP4.78□□□□□ -1.64
PTCD3-205ENST00000464541 SDR42E2A6NKP2 422 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 ZNF732B4DXR9 585 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 STX6O43752 255 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 CLN5O75503 358 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 RAD51DO75771 328 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 FGF19O95750 216 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 VDRP11473 427 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 SELEP16581 610 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 SRD5A2P31213 254 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 KRT2P35908 639 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 ETV5P41161 510 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 SCARB2Q14108 478 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 HIGD2BQ4VC39 106 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 UBLCP1Q8WVY7 318 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-205ENST00000464541 ZNF597Q96LX8 424 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 CCM2Q9BSQ5 444 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 RPP25Q9BUL9 199 aaKnown RBP4.77□□□□□ -1.65
PTCD3-205ENST00000464541 PINK1Q9BXM7 581 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 RSPH9Q9H1X1 276 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-205ENST00000464541 TUFT1Q9NNX1 390 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 MRGBPQ9NV56 204 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 GMEB2Q9UKD1 530 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 GTF3C4Q9UKN8 822 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 TSPAN16Q9UKR8 245 aa4.77□□□□□ -1.65
PTCD3-205ENST00000464541 A0A1B0GVY2 172 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 ARHGEF33A8MVX0 844 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 MLNRO43193 412 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 ACSL4O60488 711 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 HOXD4P09016 255 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-205ENST00000464541 ADORA3P0DMS8 318 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 CAPN2P17655 700 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 CCND3P30281 292 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-205ENST00000464541 C11orf88Q6PI97 169 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 FAM47EQ6ZV65 393 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 RFPL4BQ6ZWI9 263 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 CARM1Q86X55 608 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 CATSPER3Q86XQ3 398 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 SIAH3Q8IW03 269 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 OR8H3Q8N146 312 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 RNF149Q8NC42 400 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 CD99L2Q8TCZ2 262 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 TOMM40LQ969M1 308 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 ADPGKQ9BRR6 497 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 ZWILCHQ9H900 591 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 JPT2Q9H910 190 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 MIS18AQ9NYP9 233 aa4.76□□□□□ -1.65
PTCD3-205ENST00000464541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTCD3-205ENST00000464541 SERINC4A6NH21 518 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 ANKDD1BA6NHY2 528 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 CTDSPLO15194 276 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 ANGPTL1O95841 491 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 IL4RP24394 825 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 RPL9P32969 192 aaKnown RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 FRKP42685 505 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 ZFP36L2P47974 494 aaKnown RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 CLCN4P51793 760 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 CD300CQ08708 224 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 ZNF239Q16600 458 aaKnown RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 KRT77Q7Z794 578 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 TDHQ8IZJ6 230 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 ZNF444Q8N0Y2 327 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 ELMOD1Q8N336 334 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 SPEM1Q8N4L4 309 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 UXS1Q8NBZ7 420 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 SNRNP40Q96DI7 357 aaKnown RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 RASL10BQ96S79 203 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 HNRNPABQ99729 332 aaKnown RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 STRADBQ9C0K7 418 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms