RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PIEZO2Q9H5I5 2752 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 SCN3AQ9NY46 2000 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 BLACEA4D250 179 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 PSMD12O00232 456 aaPredicted RBP12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 B3GALT2O43825 422 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 GLRA3O75311 464 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 SCELO95171 688 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 CLDN9O95484 217 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 SERPINA7P05543 415 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 HNRNPH1P31943 449 aaKnown RBP12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 MTTPP55157 894 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 RAB8AP61006 207 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 RHAGQ02094 409 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 ABHD17CQ6PCB6 329 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 TMEM151AQ8N4L1 468 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 CCDC126Q96EE4 140 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 PEX11GQ96HA9 241 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 NUDT9Q9BW91 350 aa12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 COPS7BQ9H9Q2 264 aaPredicted RBP12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF71Q9NQZ8 489 aaPredicted RBP12.32□□□□□ -0.44
R3HDM1-213ENST00000463230 FFAR3O14843 346 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 GPR42O15529 346 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 SHBGP04278 402 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ATP5F1P24539 256 aaPredicted RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ITGA3P26006 1051 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 CASRP41180 1078 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 RAB38P57729 211 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 BTN3A2P78410 334 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 COL9A2Q14055 689 aaPredicted RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 PCOLCEQ15113 449 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 MINDY4Q4G0A6 757 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 CPEB2Q7Z5Q1 589 aaKnown RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 TMEM151BQ8IW70 566 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 CA13Q8N1Q1 262 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 MREGQ8N565 214 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 TEX19Q8NA77 164 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ARMC2Q8NEN0 867 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF483Q8TF39 744 aaPredicted RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ROPN1BQ9BZX4 212 aaPredicted RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ROPN1Q9HAT0 212 aaPredicted RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 LYRM4Q9HD34 91 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 MRPS33Q9Y291 106 aaKnown RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF860A6NHJ4 632 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 A8MT66 165 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 FOXE1O00358 373 aaPredicted RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 TBX6O95947 436 aaPredicted RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 OTCP00480 354 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 SBK3P0C264 359 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 PCNAP12004 261 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 CCNG1P51959 295 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 HERVK_113P63132 956 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 EXT1Q16394 746 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 MFSD4BQ5TF39 518 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 AGAP7PQ5VUJ5 663 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ANKRD37Q7Z713 158 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 OR5T3Q8NGG3 340 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 RDH11Q8TC12 318 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 PHF21BQ96EK2 531 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 IMMP1LQ96LU5 166 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 AGAP4Q96P64 663 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 LMF1Q96S06 567 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ERVK-6Q9BXR3 956 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF552Q9H707 407 aaPredicted RBP12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 DMRT3Q9NQL9 472 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 PRDM9Q9NQV7 894 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 TMEM216Q9P0N5 145 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 SPTA1P02549 2419 aa12.31□□□□□ -0.44
R3HDM1-213ENST00000463230 A6NL46 340 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 C4orf51C9J302 202 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 CDK2AP1O14519 115 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 SIX3O95343 332 aaPredicted RBP12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 KRT15P19012 456 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 PTX3P26022 381 aaPredicted RBP12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 EEF1A2Q05639 463 aaKnown RBP12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 CUL3Q13618 768 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 CCDC153Q494R4 210 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 DEPDC1Q5TB30 811 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 KHDRBS2Q5VWX1 349 aaKnown RBP12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 IGFL2Q6UWQ7 119 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 SH2D5Q6ZV89 423 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 ATP6V1E2Q96A05 226 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 NOL11Q9H8H0 719 aaKnown RBP12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF160Q9HCG1 818 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 MKS1Q9NXB0 559 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 TBK1Q9UHD2 729 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 MID2Q9UJV3 735 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 RAB21Q9UL25 225 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 LRRC14BA6NHZ5 514 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 H3BQF6 201 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 OR7A17O14581 309 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 JRKO75564 520 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 PDGFAP04085 211 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 CRHR1P34998 444 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 CCT5P48643 541 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 HSD17B7P56937 341 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 CRB2Q5IJ48 1285 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 PLAG1Q6DJT9 500 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF595Q8IYB9 648 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 HUS1BQ8NHY5 278 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 WDR20Q8TBZ3 569 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms