RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 ZNF33BQ06732 778 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 TBL3Q12788 808 aaKnown RBP18.19■□□□□ 0.5
XPA-202ENST00000462523 FAM69BQ5VUD6 431 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 ATG16L1Q676U5 607 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 MRPL14Q6P1L8 145 aaKnown RBP18.19■□□□□ 0.5
XPA-202ENST00000462523 RNF165Q6ZSG1 346 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 TRIM42Q8IWZ5 723 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 ZNF248Q8NDW4 579 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 OR2T11Q8NH01 316 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 TWIST2Q8WVJ9 160 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 CKAP2Q8WWK9 683 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 COL26A1Q96A83 441 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 KCNC2Q96PR1 638 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 SERPINI1Q99574 410 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 PRM3Q9NNZ6 103 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 PNPOQ9NVS9 261 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 HCN3Q9P1Z3 774 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 CDC14AQ9UNH5 594 aa18.19■□□□□ 0.5
XPA-202ENST00000462523 SCELO95171 688 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 HSD3B1P14060 373 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 TCN2P20062 427 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 FBLP22087 321 aaKnown RBP18.18■□□□□ 0.5
XPA-202ENST00000462523 HSD3B2P26439 372 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 BSGP35613 385 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 EIF2S3P41091 472 aaKnown RBP18.18■□□□□ 0.5
XPA-202ENST00000462523 AVPR1BP47901 424 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 ARHGAP40Q5TG30 622 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 VASH2Q86V25 355 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 IL22RA1Q8N6P7 574 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 DYDC1Q8WWB3 177 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 KCNE4Q8WWG9 221 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 ILKAPQ9H0C8 392 aaPredicted RBP18.18■□□□□ 0.5
XPA-202ENST00000462523 IFT80Q9P2H3 777 aaPredicted RBP18.18■□□□□ 0.5
XPA-202ENST00000462523 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.18■□□□□ 0.5
XPA-202ENST00000462523 RAXQ9Y2V3 346 aa18.18■□□□□ 0.5
XPA-202ENST00000462523 ACACAQ13085 2346 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 PIP5K1BO14986 540 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 EEDO75530 441 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 SEMA3DO95025 777 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 SNUPNO95149 360 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 ATP5A1P25705 553 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 DLSTP36957 453 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 FOXK2Q01167 660 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 RUNX2Q13950 521 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 NCF4Q15080 339 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 OR4C11Q6IEV9 310 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 OVCH1Q7RTY7 1134 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 PROSER1Q86XN7 944 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 METTL4Q8N3J2 472 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 GBP7Q8N8V2 638 aaPredicted RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 RGMAQ96B86 450 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 FAR2Q96K12 515 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 TBCDQ9BTW9 1192 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 SLC26A1Q9H2B4 701 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 SLCO1B3Q9NPD5 702 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 VPS29Q9UBQ0 182 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 IL17BQ9UHF5 180 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 SSUH2Q9Y2M2 353 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 MAP4K5Q9Y4K4 846 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 IGLV3-12A0A075B6K2 115 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 KLF7O75840 302 aaPredicted RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 LINC00032P0C843 101 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 LIFP15018 202 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 WT1P19544 449 aaPredicted RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 HIST1H1TP22492 207 aaPredicted RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 RPL14P50914 215 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 RAP1GDS1P52306 607 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 EFNA3P52797 238 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 ARFIP1P53367 373 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 MTTPP55157 894 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 RPS18P62269 152 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 NUP210LQ5VU65 1888 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 MLIPQ5VWP3 458 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 Q6ZSR9 355 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 ENDOVQ8N8Q3 282 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 ACOT4Q8N9L9 421 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 SRFBP1Q8NEF9 429 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 LRRC8CQ8TDW0 803 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 ZCCHC14Q8WYQ9 949 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 FKBP10Q96AY3 582 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 C11orf24Q96F05 449 aaPredicted RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 APIPQ96GX9 242 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 C3orf30Q96M34 536 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 MAGEB18Q96M61 343 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 SERINC2Q96SA4 455 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 TRPC4Q9UBN4 977 aa18.17■□□□□ 0.5
XPA-202ENST00000462523 MRPS18BQ9Y676 258 aaKnown RBP18.17■□□□□ 0.5
XPA-202ENST00000462523 A0A0A6YYD5 115 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 VSTM2BA6NLU5 285 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 C21orf140B9A014 251 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 CHST10O43529 356 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 SKAP2O75563 359 aaPredicted RBP18.16■□□□□ 0.5
XPA-202ENST00000462523 GBAP04062 536 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 SSR2P43308 183 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 TGM3Q08188 693 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 DNASE1L3Q13609 305 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 NKG7Q16617 165 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 VWA2Q5GFL6 755 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 XKR7Q5GH72 579 aa18.16■□□□□ 0.5
XPA-202ENST00000462523 COMMD6Q7Z4G1 85 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms