RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DUS1LQ6P1R4 473 aaKnown RBP15.95■□□□□ 0.14
CCDC43-202ENST00000457422 TSEN54Q7Z6J9 526 aaKnown RBP15.95■□□□□ 0.14
CCDC43-202ENST00000457422 YAF2Q8IY57 180 aa15.95■□□□□ 0.14
CCDC43-202ENST00000457422 TTC29Q8NA56 475 aaPredicted RBP15.95■□□□□ 0.14
CCDC43-202ENST00000457422 SMPDL3AQ92484 453 aa15.95■□□□□ 0.14
CCDC43-202ENST00000457422 CDCA3Q99618 268 aaPredicted RBP15.95■□□□□ 0.14
CCDC43-202ENST00000457422 KXD1Q9BQD3 176 aa15.95■□□□□ 0.14
CCDC43-202ENST00000457422 MS4A8Q9BY19 250 aa15.95■□□□□ 0.14
CCDC43-202ENST00000457422 ZNF717Q9BY31 904 aaPredicted RBP15.95■□□□□ 0.14
CCDC43-202ENST00000457422 NAA50Q9GZZ1 169 aaKnown RBP15.95■□□□□ 0.14
CCDC43-202ENST00000457422 LHPPQ9H008 270 aa15.95■□□□□ 0.14
CCDC43-202ENST00000457422 KRT84Q9NSB2 600 aa15.95■□□□□ 0.14
CCDC43-202ENST00000457422 PCDHGB3Q9Y5G1 929 aa15.95■□□□□ 0.14
CCDC43-202ENST00000457422 PCDHGB1Q9Y5G3 927 aa15.95■□□□□ 0.14
CCDC43-202ENST00000457422 ANKDD1BA6NHY2 528 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 PLPP1O14494 284 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 NOL3O60936 208 aaKnown RBP15.94■□□□□ 0.14
CCDC43-202ENST00000457422 KRT75O95678 551 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 ANGPTL1O95841 491 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 CYP4B1P13584 511 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 JUNDP17535 347 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 ITIH1P19827 911 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 PBX2P40425 430 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 REEP5Q00765 189 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 DCTN2Q13561 401 aaKnown RBP15.94■□□□□ 0.14
CCDC43-202ENST00000457422 SCARB2Q14108 478 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 KHDRBS2Q5VWX1 349 aaKnown RBP15.94■□□□□ 0.14
CCDC43-202ENST00000457422 ZC3H7AQ8IWR0 971 aaKnown RBP15.94■□□□□ 0.14
CCDC43-202ENST00000457422 MUL1Q969V5 352 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 NODALQ96S42 347 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 PITX2Q99697 317 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 APOL4Q9BPW4 351 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 SLC6A16Q9GZN6 736 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 CUEDC1Q9NWM3 386 aaPredicted RBP15.94■□□□□ 0.14
CCDC43-202ENST00000457422 PAK1IP1Q9NWT1 392 aaPredicted RBP15.94■□□□□ 0.14
CCDC43-202ENST00000457422 TAAR2Q9P1P5 351 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 KIF17Q9P2E2 1029 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 ACSL5Q9ULC5 683 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 OR1A2Q9Y585 309 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 SNX5Q9Y5X3 404 aa15.94■□□□□ 0.14
CCDC43-202ENST00000457422 A0A1W2PPV9 198 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 ADAMDEC1O15204 470 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 APODP05090 189 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 DDCP20711 480 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 C5AR1P21730 350 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 PCMT1P22061 227 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 PSMB5P28074 263 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 CCR8P51685 355 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 CYP4F2P78329 520 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 HPCAP84074 193 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 SIM2Q14190 667 aaPredicted RBP15.93■□□□□ 0.14
CCDC43-202ENST00000457422 IRF4Q15306 451 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 SLC5A12Q1EHB4 618 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 ZNF630Q2M218 657 aaPredicted RBP15.93■□□□□ 0.14
CCDC43-202ENST00000457422 CRB2Q5IJ48 1285 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 KIAA1614Q5VZ46 1190 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 NUDT18Q6ZVK8 323 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 TSPYL5Q86VY4 417 aaPredicted RBP15.93■□□□□ 0.14
CCDC43-202ENST00000457422 NATD1Q8N6N6 113 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 ANKRD53Q8N9V6 530 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 ATG16L2Q8NAA4 619 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 OR5AK3PQ8NH89 298 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 CNIH3Q8TBE1 160 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 RAB2BQ8WUD1 216 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 ZNF347Q96SE7 839 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 DCUN1D5Q9BTE7 237 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 TMEM121BQ9BXQ6 578 aaPredicted RBP15.93■□□□□ 0.14
CCDC43-202ENST00000457422 EPS8L2Q9H6S3 715 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 WDR26Q9H7D7 661 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 MIEF1Q9NQG6 463 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 NDUFAF4Q9P032 175 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 GMPPBQ9Y5P6 360 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 PLXND1Q9Y4D7 1925 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 A0A1W2PP55 124 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 SLC35G4P0C7Q5 338 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 ARAFP10398 606 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 UQCRC2P22695 453 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 BSGP35613 385 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 PIGFQ07326 219 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 IFI44LQ53G44 452 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 C2orf27AQ580R0 203 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 PAGE2Q7Z2X7 111 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 FAM124AQ86V42 546 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 RNF130Q86XS8 419 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 SLC30A8Q8IWU4 369 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 HDDC3Q8N4P3 179 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 BPIFB6Q8NFQ5 453 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 MYOCQ99972 504 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 GABARAPL3Q9BY60 117 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 OCEL1Q9H607 264 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 GPN2Q9H9Y4 310 aaPredicted RBP15.93■□□□□ 0.14
CCDC43-202ENST00000457422 THSD1Q9NS62 852 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 DOCK9Q9BZ29 2069 aa15.93■□□□□ 0.14
CCDC43-202ENST00000457422 A0A1W2PPW3 197 aa15.92■□□□□ 0.14
CCDC43-202ENST00000457422 TMX2-CTNND1H3BSU7 103 aa15.92■□□□□ 0.14
CCDC43-202ENST00000457422 OPN1SWP03999 348 aa15.92■□□□□ 0.14
CCDC43-202ENST00000457422 CCNA2P20248 432 aa15.92■□□□□ 0.14
CCDC43-202ENST00000457422 RRM2P31350 389 aa15.92■□□□□ 0.14
CCDC43-202ENST00000457422 SOAT1P35610 550 aa15.92■□□□□ 0.14
CCDC43-202ENST00000457422 CHI3L1P36222 383 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms