RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 DPH1Q9BZG8 443 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 TUBB1Q9H4B7 451 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 VPS29Q9UBQ0 182 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 SLC12A4Q9UP95 1085 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 FIS1Q9Y3D6 152 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 MAP4K5Q9Y4K4 846 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 WDFY3Q8IZQ1 3526 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 IGLV3-12A0A075B6K2 115 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 A0A0G2JN53 185 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 LOC101059948A0A1B0GTJ6 334 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 C21orf140B9A014 251 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 C9J4A7 227 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 SAP18O00422 153 aaKnown RBP16.92■□□□□ 0.3
FAM239A-203ENST00000456563 RDH16O75452 317 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 CD63P08962 238 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 TCN2P20062 427 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 RPL14P50914 215 aaKnown RBP16.92■□□□□ 0.3
FAM239A-203ENST00000456563 MTTPP55157 894 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 TBL3Q12788 808 aaKnown RBP16.92■□□□□ 0.3
FAM239A-203ENST00000456563 AP5B1Q2VPB7 878 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 OR4C11Q6IEV9 310 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 SCIMPQ6UWF3 145 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 RGS9BPQ6ZS82 235 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 METTL4Q8N3J2 472 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 MAGEB18Q96M61 343 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 SERINC2Q96SA4 455 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 NPLQ9BXD5 320 aaPredicted RBP16.92■□□□□ 0.3
FAM239A-203ENST00000456563 ZNF717Q9BY31 904 aaPredicted RBP16.92■□□□□ 0.3
FAM239A-203ENST00000456563 SLC26A1Q9H2B4 701 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 COPS7BQ9H9Q2 264 aaPredicted RBP16.92■□□□□ 0.3
FAM239A-203ENST00000456563 AHSPQ9NZD4 102 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 CROTQ9UKG9 612 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 CCL27Q9Y4X3 112 aa16.92■□□□□ 0.3
FAM239A-203ENST00000456563 SEC16AO15027 2179 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 NPIPB8E9PQR5 432 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 SLC28A1O00337 649 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 RTCAO00442 366 aaKnown RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 B3GALT2O43825 422 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 HIST1H1TP22492 207 aaPredicted RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 ATP5A1P25705 553 aaKnown RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 BSGP35613 385 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 EIF2S3P41091 472 aaKnown RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 SSR2P43308 183 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 DNASE1L3Q13609 305 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 SLC9A5Q14940 896 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 NCF4Q15080 339 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 MLIPQ5VWP3 458 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 ZNF793Q6ZN11 406 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 ZCCHC7Q8N3Z6 543 aaKnown RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 ACOT4Q8N9L9 421 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 FAM76AQ8TAV0 307 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 CCT7Q99832 543 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 GPR87Q9BY21 358 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 MRPL1Q9BYD6 325 aaKnown RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 DDX31Q9H8H2 851 aaKnown RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 MKKSQ9NPJ1 570 aaPredicted RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 ZNF282Q9UDV7 671 aaPredicted RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 GPN3Q9UHW5 284 aaPredicted RBP16.91■□□□□ 0.3
FAM239A-203ENST00000456563 ADAM29Q9UKF5 820 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 PCDHGA6Q9Y5G7 932 aa16.91■□□□□ 0.3
FAM239A-203ENST00000456563 AHCTF1Q8WYP5 2266 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 ZNF860A6NHJ4 632 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 VSTM2BA6NLU5 285 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 PIP5K1BO14986 540 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 CHST10O43529 356 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 DNAJB6O75190 326 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 RSL1D1O76021 490 aaKnown RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 DLSTP36957 453 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 RPS15P62841 145 aaKnown RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 MAT1AQ00266 395 aaKnown RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 HMGCS1Q01581 520 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 RUNX2Q13950 521 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 IMPG1Q17R60 797 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 SYT16Q17RD7 645 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 Q6ZSR9 355 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 PROSER1Q86XN7 944 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 KDF1Q8NAX2 398 aaPredicted RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 OR5T3Q8NGG3 340 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 OR51Q1Q8NH59 317 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 CHTF18Q8WVB6 975 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 ZCCHC14Q8WYQ9 949 aaKnown RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 KIAA1143Q96AT1 154 aaPredicted RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 NAF1Q96HR8 494 aaKnown RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 METTL2AQ96IZ6 378 aaKnown RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 C7orf26Q96N11 449 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 EFHD1Q9BUP0 239 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 SORBS1Q9BX66 1292 aaKnown RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 TGIF2Q9GZN2 237 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 WDR54Q9H977 334 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 PFDN4Q9NQP4 134 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 PNPOQ9NVS9 261 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 HCN3Q9P1Z3 774 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 TRPC4Q9UBN4 977 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 KCND3Q9UK17 655 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 FARSAQ9Y285 508 aaKnown RBP16.9■□□□□ 0.3
FAM239A-203ENST00000456563 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 PTGDR2Q9Y5Y4 395 aa16.9■□□□□ 0.3
FAM239A-203ENST00000456563 FER1L5A0AVI2 2057 aa16.89■□□□□ 0.29
FAM239A-203ENST00000456563 RGS14O43566 566 aa16.89■□□□□ 0.29
FAM239A-203ENST00000456563 CNOT3O75175 753 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms