RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 TRIM40Q6P9F5 258 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 FAM180AQ6UWF9 173 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 SUN3Q8TAQ9 357 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 KCTD4Q8WVF5 259 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 FAR1Q8WVX9 515 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 IFT81Q8WYA0 676 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 FMO2Q99518 471 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 NPLQ9BXD5 320 aaPredicted RBP19.94■□□□□ 0.78
HMGB3-205ENST00000455596 CDC42EP4Q9H3Q1 356 aaKnown RBP19.94■□□□□ 0.78
HMGB3-205ENST00000455596 PRDM9Q9NQV7 894 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 ZNF490Q9ULM2 529 aaPredicted RBP19.94■□□□□ 0.78
HMGB3-205ENST00000455596 ASB1Q9Y576 335 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 RELNP78509 3460 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 A0A0G2JN53 185 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 CCDC189A1A4V9 331 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 HMX2A2RU54 273 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 BLACEA4D250 179 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 OR5H15A6NDH6 313 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 SYCE1LA8MT33 242 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 MYBL2P10244 700 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 EPORP19235 508 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 CD22P20273 847 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 SLC26A5P58743 744 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 IRF9Q00978 393 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 CHIT1Q13231 466 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 TBCCQ15814 346 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 INAQ16352 499 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 ADPRMQ3LIE5 342 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 VN1R5Q7Z5H4 357 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 CENPLQ8N0S6 344 aaPredicted RBP19.93■□□□□ 0.78
HMGB3-205ENST00000455596 ST6GALNAC3Q8NDV1 305 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 ARMC2Q8NEN0 867 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 OR2L5Q8NG80 312 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 RHEBL1Q8TAI7 183 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 UBTD2Q8WUN7 234 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 REXO4Q9GZR2 422 aaKnown RBP19.93■□□□□ 0.78
HMGB3-205ENST00000455596 ABI3Q9P2A4 366 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 OPTCQ9UBM4 332 aa19.93■□□□□ 0.78
HMGB3-205ENST00000455596 FLNCQ14315 2725 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 A0A096LPK6 155 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 FAM227AF5H4B4 570 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 K7EPI3 171 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 B3GALT2O43825 422 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 SEMA7AO75326 666 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 MAOAP21397 527 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 TYK2P29597 1187 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 SERPINB8P50452 374 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 TAS2R50P59544 299 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 RUNX2Q13950 521 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 MEP1AQ16819 746 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 UBAP2Q5T6F2 1119 aaKnown RBP19.92■□□□□ 0.78
HMGB3-205ENST00000455596 FCRLBQ6BAA4 426 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 ADNP2Q6IQ32 1131 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 KLC3Q6P597 504 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 ZGRF1Q86YA3 2104 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 CYP4X1Q8N118 509 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 BCORP1Q8N888 145 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 SSC4DQ8WTU2 575 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 FUT8Q9BYC5 575 aa19.92■□□□□ 0.78
HMGB3-205ENST00000455596 IGKV3D-11A0A0A0MRZ8 115 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 TCRBV16S1A1N1A0A5B0 115 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 KLHL2O95198 593 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 ACSL3O95573 720 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 TBX6O95947 436 aaPredicted RBP19.91■□□□□ 0.78
HMGB3-205ENST00000455596 EDN3P14138 238 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 CASP2P42575 452 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 PLA2G16P53816 162 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 RAB38P57729 211 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 TGM3Q08188 693 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 E2F2Q14209 437 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 ACAP2Q15057 778 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 ACER2Q5QJU3 275 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 CRLF3Q8IUI8 442 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 BEST3Q8N1M1 668 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 SLC5A8Q8N695 610 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 KIF18AQ8NI77 898 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 ADAMTS18Q8TE60 1221 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 UBE2E3Q969T4 207 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 QRFPRQ96P65 431 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 PSMG3-AS1Q96PY0 264 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 SERINC2Q96SA4 455 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 COPS7BQ9H9Q2 264 aaPredicted RBP19.91■□□□□ 0.78
HMGB3-205ENST00000455596 PRM3Q9NNZ6 103 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 NECTIN3Q9NQS3 549 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 MMACHCQ9Y4U1 282 aa19.91■□□□□ 0.78
HMGB3-205ENST00000455596 FLNBO75369 2602 aaKnown RBP19.91■□□□□ 0.78
HMGB3-205ENST00000455596 RP1L1Q8IWN7 2480 aaPredicted RBP19.91■□□□□ 0.78
HMGB3-205ENST00000455596 SAGE2PA6NJ88 616 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 PRAMEF2O60811 474 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 ALDOAP04075 364 aaKnown RBP19.9■□□□□ 0.78
HMGB3-205ENST00000455596 INHBAP08476 426 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 MTHFD2P13995 350 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 MSH2P43246 934 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 MTTPP55157 894 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 ABHD17CQ6PCB6 329 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 ELP5Q8TE02 316 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 SLC44A1Q8WWI5 657 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 OLAHQ9NV23 265 aa19.9■□□□□ 0.78
HMGB3-205ENST00000455596 MRPS33Q9Y291 106 aaKnown RBP19.9■□□□□ 0.78
HMGB3-205ENST00000455596 ANGPTL3Q9Y5C1 460 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms