RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 GLCCI1Q86VQ1 547 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 SLC37A3Q8NCC5 494 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 POF1BQ8WVV4 589 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 FUBP3Q96I24 572 aaKnown RBP eCLIP13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 BEX1Q9HBH7 125 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 CCDC59Q9P031 241 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 SLC6A14Q9UN76 642 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 HNF1BP35680 557 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 CRISP1P54107 249 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 KLHDC8BQ8IXV7 354 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 APH1BQ8WW43 257 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TRIB3Q96RU7 358 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 C2orf49Q9BVC5 232 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TSSK6Q9BXA6 273 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 C11orf54Q9H0W9 315 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 SERHLQ9NQF3 203 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TMEM45AQ9NWC5 275 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 H2AFY2Q9P0M6 372 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 CORO2BQ9UQ03 480 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 NAALAD2Q9Y3Q0 740 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 MIA3Q5JRA6 1907 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 HMX3A6NHT5 357 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TSPAN4O14817 238 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TSPAN9O75954 239 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 BPIP17213 487 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TALDO1P37837 337 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 KIAA0040Q15053 153 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 RGNQ15493 299 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 SMUG1Q53HV7 270 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 CLEC12AQ5QGZ9 265 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 NXPE1Q8N323 547 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 XAGE5Q8WWM1 108 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TMED9Q9BVK6 235 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 RNF121Q9H920 327 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 PRAMEF33A0A0G2JMD5 474 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 A0A1B0GVC2 190 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 A6NIN4 97 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 DRGXA6NNA5 263 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 SLC30A4O14863 429 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 PRAMEF10O60809 474 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 IGSF6O95976 241 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 CH25HO95992 272 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 IGFBP1P08833 259 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 ATF4P18848 351 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 RAB14P61106 215 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 RPS13P62277 151 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 MC1RQ01726 317 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 COX10Q12887 443 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 GRB14Q14449 540 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 CXorf57Q6NSI4 855 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 PAQR6Q6TCH4 344 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 Q8N402 240 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 LRRC17Q8N6Y2 441 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 DENND6BQ8NEG7 585 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 FOXJ1Q92949 421 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 KCTD7Q96MP8 289 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 NTMT1Q9BV86 223 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TMEM184CQ9NVA4 438 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 CLCA2Q9UQC9 943 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 MAU2Q9Y6X3 613 aa13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 URB1O60287 2271 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-210ENST00000453744 TRAV6A0A075B6T7 132 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SLC38A8A6NNN8 435 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 M0QZQ0 153 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 ALX3O95076 343 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 AMD1P17707 334 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SDC2P34741 201 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 MAN2A2P49641 1150 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SELENOWP63302 87 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 CNTN1Q12860 1018 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 MICAQ29983 383 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 PLAG1Q6DJT9 500 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 HIST2H2AA3Q6FI13 130 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SERPINA13PQ6UXR4 307 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 RFLNAQ6ZTI6 216 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 FAM46DQ8NEK8 389 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 GPR62Q9BZJ7 368 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SPRTNQ9H040 489 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 PTGFRNQ9P2B2 879 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SEC14L4Q9UDX3 406 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 KCNE2Q9Y6J6 123 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 GABRR3A8MPY1 467 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 AKR7A2O43488 359 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 NME6O75414 186 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SERPINI2O75830 405 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 CATP04040 527 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 MAP2K3P46734 347 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 RAB8AP61006 207 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 BNC1Q01954 994 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 ZNF267Q14586 743 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 CCDC149Q6ZUS6 474 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 TRIM46Q7Z4K8 759 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 VWA5B2Q8N398 1253 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SLC7A6Q92536 515 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 CCDC120Q96HB5 630 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 TMEM80Q96HE8 168 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 RACGAP1Q9H0H5 632 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms