RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SEC16BQ96JE7 1060 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 FAR2Q96K12 515 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 MRPL57Q9BQC6 102 aaKnown RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 TGIF2Q9GZN2 237 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 NT5DC2Q9H857 520 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 COPS7BQ9H9Q2 264 aaPredicted RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 GPR83Q9NYM4 423 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 COPG2Q9UBF2 871 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 PCDHGB7Q9Y5F8 929 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 DIDO1Q9BTC0 2240 aaKnown RBP13.75□□□□□ -0.21
USP39-206ENST00000448971 A0A088AWK7 358 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 A0A0G2JN53 185 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 A1L4Q6 167 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 MASP2O00187 686 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 JRKO75564 520 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 CLEC3AO75596 197 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 CDC123O75794 336 aaPredicted RBP13.75□□□□□ -0.21
USP39-206ENST00000448971 BMP10O95393 424 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 DDAH2O95865 285 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 TAC1P20366 129 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 ZNF10P21506 573 aaPredicted RBP13.75□□□□□ -0.21
USP39-206ENST00000448971 ITGA3P26006 1051 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 COL8A1P27658 744 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 HNRNPH1P31943 449 aaKnown RBP13.75□□□□□ -0.21
USP39-206ENST00000448971 HSD17B3P37058 310 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 HYAL2Q12891 473 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 MRPL49Q13405 166 aaKnown RBP13.75□□□□□ -0.21
USP39-206ENST00000448971 DDX39BQ13838 428 aaKnown RBP13.75□□□□□ -0.21
USP39-206ENST00000448971 PCBP2Q15366 365 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP39-206ENST00000448971 GRHL2Q6ISB3 625 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 MED27Q6P2C8 311 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 TRIM40Q6P9F5 258 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 EMBQ6PCB8 327 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 ACMSDQ8TDX5 336 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 METTL21AQ8WXB1 218 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 ATP6V1E2Q96A05 226 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 KLHL31Q9H511 634 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 ZNF451Q9Y4E5 1061 aa13.75□□□□□ -0.21
USP39-206ENST00000448971 CCDC88CQ9P219 2028 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 NSG1A0A0A6YYJ2 146 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 A8MT66 165 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 C4orf51C9J302 202 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 STX16-NPEPL1H3BU86 382 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 PSMD12O00232 456 aaPredicted RBP13.74□□□□□ -0.21
USP39-206ENST00000448971 E2F3O00716 465 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 STX16O14662 325 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 CLDN1O95832 211 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 UQCRHP07919 91 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 C8orf89P0DMQ9 161 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 JAK1P23458 1154 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 PHEXP78562 749 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 TGM3Q08188 693 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 IFFO1Q0D2I5 559 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 AIMP2Q13155 320 aaKnown RBP13.74□□□□□ -0.21
USP39-206ENST00000448971 ERCC6LQ2NKX8 1250 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 ZNF787Q6DD87 383 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 WDR93Q6P2C0 686 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 KIRREL2Q6UWL6 708 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 LCA5Q86VQ0 697 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 GALNT16Q8N428 558 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 RBMXL3Q8N7X1 1067 aaKnown RBP13.74□□□□□ -0.21
USP39-206ENST00000448971 FDCSPQ8NFU4 85 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 OR11G2Q8NGC1 345 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 MZB1Q8WU39 189 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 OR1F2PQ96R84 312 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 MESP1Q9BRJ9 268 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 NUDT9Q9BW91 350 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 VN1R1Q9GZP7 353 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 REXO4Q9GZR2 422 aaKnown RBP13.74□□□□□ -0.21
USP39-206ENST00000448971 RHBGQ9H310 441 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 IPPKQ9H8X2 491 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 ZNF160Q9HCG1 818 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 ATP13A2Q9NQ11 1180 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 C19orf25Q9UFG5 118 aaPredicted RBP13.74□□□□□ -0.21
USP39-206ENST00000448971 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
USP39-206ENST00000448971 PCDH17O14917 1159 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 CHST10O43529 356 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 CDH16O75309 829 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 GLRA3O75311 464 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 WFS1O76024 890 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 HPP00738 406 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 ALPPP05187 535 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 FHP07954 510 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 COX6A1P12074 109 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 HOXB1P14653 301 aaPredicted RBP13.73□□□□□ -0.21
USP39-206ENST00000448971 SERPINB1P30740 379 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 CASP2P42575 452 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 PLA2G16P53816 162 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 BTN3A2P78410 334 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 METTL2BQ6P1Q9 378 aaKnown RBP13.73□□□□□ -0.21
USP39-206ENST00000448971 VN1R5Q7Z5H4 357 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 TDRPQ86YL5 185 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 SHISA5Q8N114 240 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 OR2L5Q8NG80 312 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 OR2W6PQ8NHA6 318 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 AENQ8WTP8 325 aaKnown RBP13.73□□□□□ -0.21
USP39-206ENST00000448971 TBC1D20Q96BZ9 403 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 REPS1Q96D71 796 aa13.73□□□□□ -0.21
USP39-206ENST00000448971 MS4A6EQ96DS6 147 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms