RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 NT5DC2Q9H857 520 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 RAB23Q9ULC3 237 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 PRELID3BQ9Y3B1 194 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 QSOX1O00391 747 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 TPST2O60704 377 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 HPGDSO60760 199 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PTP4A3O75365 173 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 WDPCPO95876 746 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 SRCP12931 536 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 RPL35P42766 123 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 TAF6P49848 677 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 BTG1P62324 171 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 ACVR1Q04771 509 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 IHHQ14623 411 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 RASSF6Q6ZTQ3 369 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 POF1BQ8WVV4 589 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 MYLPFQ96A32 169 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 CDKN2AIPNLQ96HQ2 116 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 SPATA33Q96N06 139 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 OSMRQ99650 979 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 ARHGAP39Q9C0H5 1083 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 LYARQ9NX58 379 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 KCNMB2Q9Y691 235 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 DOCK1Q14185 1865 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 MPZL2O60487 215 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 TLR5O60602 858 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 C22orf31O95567 290 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 HSPA7P48741 367 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 AGFG1P52594 562 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PUDPQ08623 228 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 DUSP6Q16828 381 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 HSD17B12Q53GQ0 312 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 DGKKQ5KSL6 1271 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 TMEM107Q6UX40 140 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 TFAP2EQ6VUC0 442 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 OR9Q2Q8NGE9 314 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 C1GALT1C1Q96EU7 318 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PANX1Q96RD7 426 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 NELL2Q99435 816 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 MND1Q9BWT6 205 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 LDAHQ9H6V9 325 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 NUDT4Q9NZJ9 180 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 SRRDQ9UH36 339 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 UBQLN1Q9UMX0 589 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 LSM2Q9Y333 95 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 TRAV6A0A075B6T7 132 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 DPM1O60762 260 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PAGE1O75459 146 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 ARIH2O95376 493 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 GUCA1CO95843 209 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 MMP2P08253 660 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 HBQ1P09105 142 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 ATXN1LP0C7T5 689 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 DNASE1P24855 282 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 CNR2P34972 360 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 KCNJ10P78508 379 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PURAQ00577 322 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 FKBP1CQ5VVH2 108 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 RETSATQ6NUM9 610 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 CATSPERGQ6ZRH7 1159 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 RASGRP3Q8IV61 690 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PIH1D2Q8WWB5 315 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 CIDECQ96AQ7 238 aaPredicted RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 NXPE2Q96DL1 559 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 FCRL2Q96LA5 508 aaPredicted RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 GOLGA2P5Q9HBQ8 144 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PDGFCQ9NRA1 345 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 GJD2Q9UKL4 321 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 NEU3Q9UQ49 428 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 ENTPD6O75354 484 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 MOCS2O96007 188 aaPredicted RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PAHP00439 452 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 OR56A5P0C7T3 313 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PKMP14618 531 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 FOSL1P15407 271 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 TNFRSF1BP20333 461 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 DGKEP52429 567 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 HMGCS2P54868 508 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 CLDN8P56748 225 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 BACE1P56817 501 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 ELOAQ14241 798 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 PCBP2Q15366 365 aaKnown RBP eCLIP9.05□□□□□ -0.964e-11■■■■■ 46.3
SYNPO2-204ENST00000448416 EXOC3L2Q2M3D2 409 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 ZNF730Q6ZMV8 503 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 MOB2Q70IA6 237 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 METTL3Q86U44 580 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 OR8K3Q8NH51 312 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 FANK1Q8TC84 345 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 OTUB1Q96FW1 271 aaPredicted RBP9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 COQ10AQ96MF6 247 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 KATNB1Q9BVA0 655 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 HCN3Q9P1Z3 774 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 DLGAP4Q9Y2H0 992 aa9.05□□□□□ -0.96
SYNPO2-204ENST00000448416 LOC285095A0A1B0GVY8 99 aa9.04□□□□□ -0.96
SYNPO2-204ENST00000448416 M0R233 179 aa9.04□□□□□ -0.96
SYNPO2-204ENST00000448416 PIRO00625 290 aa9.04□□□□□ -0.96
SYNPO2-204ENST00000448416 FPGTO14772 594 aa9.04□□□□□ -0.96
SYNPO2-204ENST00000448416 GMDSO60547 372 aa9.04□□□□□ -0.96
SYNPO2-204ENST00000448416 HRGP04196 525 aa9.04□□□□□ -0.96
SYNPO2-204ENST00000448416 INSRRP14616 1297 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms