RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CDCP2Q5VXM1 449 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 TLDC1Q6P9B6 456 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 PAOXQ6QHF9 649 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 DHRS13Q6UX07 377 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 ZNF793Q6ZN11 406 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 ACOT4Q8N9L9 421 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 CDC26Q8NHZ8 85 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 STRADBQ9C0K7 418 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 ANKHQ9HCJ1 492 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 SIDT1Q9NXL6 827 aaKnown RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 ZIM2Q9NZV7 527 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 AKAP7Q9P0M2 348 aaPredicted RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 A0A0A6YYD5 115 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 SPAARA0A1B0GVQ0 90 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 EFCAB7A8K855 629 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 H3BMH7 237 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 SLC22A2O15244 555 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 ASMTP46597 345 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 EMP3P54852 163 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 MTTPP55157 894 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 UFM1P61960 85 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 FAM214AQ32MH5 1076 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 AGKQ53H12 422 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 CYB5D1Q6P9G0 228 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 SLCO6A1Q86UG4 719 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 ZCCHC7Q8N3Z6 543 aaKnown RBP18.54■□□□□ 0.56
SGCE-207ENST00000447873 AMER3Q8N944 861 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 OR9I1Q8NGQ6 314 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 EGLN2Q96KS0 407 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 CMKLR1Q99788 373 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 DPY30Q9C005 99 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 ENAMQ9NRM1 1142 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 OCIAD1Q9NX40 245 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 CCDC167Q9P0B6 97 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 RARRES3Q9UL19 164 aa18.54■□□□□ 0.56
SGCE-207ENST00000447873 B3GALT2O43825 422 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 MT-CO3P00414 261 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 IL1RNP18510 177 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 CERS1P27544 350 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 PIK3R1P27986 724 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 CLDN8P56748 225 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 SNRPNP63162 240 aaKnown RBP18.53■□□□□ 0.56
SGCE-207ENST00000447873 SIM1P81133 766 aaPredicted RBP18.53■□□□□ 0.56
SGCE-207ENST00000447873 SLAMF1Q13291 335 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 COL9A2Q14055 689 aaPredicted RBP18.53■□□□□ 0.56
SGCE-207ENST00000447873 SLC9A5Q14940 896 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 MUM1Q2TAK8 710 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 C6orf89Q6UWU4 347 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 RIPOR1Q6ZS17 1223 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 TMEM132CQ8N3T6 1108 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 ARHGEF39Q8N4T4 335 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 PROKR1Q8TCW9 393 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 C16orf78Q8WTQ4 265 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 C10orf90Q96M02 699 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 SERINC2Q96SA4 455 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 NAALAD2Q9Y3Q0 740 aa18.53■□□□□ 0.56
SGCE-207ENST00000447873 PTPRZ1P23471 2315 aaPredicted RBP18.53■□□□□ 0.56
SGCE-207ENST00000447873 CAPN14A8MX76 684 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 ANKRD28O15084 1053 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 TMPRSS11DO60235 418 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 GALR3O60755 368 aaPredicted RBP18.52■□□□□ 0.56
SGCE-207ENST00000447873 KLHL18O94889 574 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 SCELO95171 688 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 LRATO95237 230 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 FAM58BPP0C7Q3 252 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 FTH1P19P0C7X4 201 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 JAK1P23458 1154 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 TAS2R50P59544 299 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 SKP1P63208 163 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 FAM53BQ14153 422 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 ISXQ2M1V0 245 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 FAM91A1Q658Y4 838 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 FOXR1Q6PIV2 292 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 PRSS41Q7RTY9 318 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 TREML1Q86YW5 311 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 TEX37Q96LM6 180 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 DEPDC7Q96QD5 511 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 ZBTB18Q99592 522 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 NDC1Q9BTX1 674 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 ACTL8Q9H568 366 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 CUTCQ9NTM9 273 aa18.52■□□□□ 0.56
SGCE-207ENST00000447873 TM4SF5O14894 197 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 CSO75390 466 aaKnown RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 CEACAM1P13688 526 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 PRPS1L1P21108 318 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 GSTM5P46439 218 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 ARSFP54793 590 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 CLDN6P56747 220 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 TRA2BP62995 288 aaKnown RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 HES3Q5TGS1 186 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 YOD1Q5VVQ6 348 aaPredicted RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 NIPAL1Q6NVV3 410 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 BPHLQ86WA6 291 aaPredicted RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 PPP1R3BQ86XI6 285 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 PDSS2Q86YH6 399 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 KRTCAP2Q8N6L1 136 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 GFM2Q969S9 779 aaKnown RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 SLC45A3Q96JT2 553 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 MYNNQ9NPC7 610 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 TMEM45AQ9NWC5 275 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms