RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 C11orf91Q3C1V1 193 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 HMBOX1Q6NT76 420 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 TMEM207Q6UWW9 146 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 Q6ZSR9 355 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 RNF44Q7L0R7 432 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 CHMP1BQ7LBR1 199 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 CDH24Q86UP0 819 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 DENND6BQ8NEG7 585 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 NCSTNQ92542 709 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 NR4A3Q92570 626 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 DUS3LQ96G46 650 aaKnown RBP16.02■□□□□ 0.15
TCOF1-206ENST00000445265 CCDC115Q96NT0 180 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 DSN1Q9H410 356 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 SLCO3A1Q9UIG8 710 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 UTS2RQ9UKP6 389 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 EDDM13A0A1B0GTR0 161 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 IGLV3-25P01717 112 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 CRISP1P54107 249 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 NCCRP1Q6ZVX7 275 aaPredicted RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 DMRTB1Q96MA1 342 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 MED28Q9H204 178 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 ERI3O43414 337 aaKnown RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 AGR2O95994 175 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 SUOXP51687 545 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 CLCNKAP51800 687 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 RTL4Q6ZR62 310 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 TESCQ96BS2 214 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 ARHGAP39Q9C0H5 1083 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 SMG9Q9H0W8 520 aaKnown RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 WDR26Q9H7D7 661 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 ADAMTSL1Q8N6G6 1762 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 TARM1B6A8C7 271 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 FAAHO00519 579 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 SLC2A2P11168 524 aaPredicted RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 ITGAMP11215 1152 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 CPN2P22792 545 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 AVPR1BP47901 424 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 ST3GAL3Q11203 375 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 GRHL2Q6ISB3 625 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 UBE2J2Q8N2K1 259 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 OR52N2Q8NGI0 321 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 OR14C36Q8NHC7 312 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 ZNF583Q96ND8 569 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 SMIM14Q96QK8 99 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 YIPF4Q9BSR8 244 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 AP1M2Q9Y6Q5 423 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 XIRP1Q702N8 1843 aaKnown RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 MMP20O60882 483 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 HLA-DPB1P04440 258 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 AMD1P17707 334 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 PSMD4P55036 377 aaKnown RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 TBPL1P62380 186 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 DSC1Q08554 894 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 SELPLGQ14242 412 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 PLEKHG7Q6ZR37 379 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 ZNF548Q8NEK5 533 aaPredicted RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 OR8J1Q8NGP2 316 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 OR4C6Q8NH72 309 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 METTL2AQ96IZ6 378 aaKnown RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 KLF16Q9BXK1 252 aaPredicted RBP16.01■□□□□ 0.15
TCOF1-206ENST00000445265 HEBP2Q9Y5Z4 205 aa16.01■□□□□ 0.15
TCOF1-206ENST00000445265 CLCA1A8K7I4 914 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 BTN3A3O00478 584 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 SLC10A3P09131 477 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 SBK3P0C264 359 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 MTHFD2P13995 350 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 MEF2AQ02078 507 aaPredicted RBP16■□□□□ 0.15
TCOF1-206ENST00000445265 RELAQ04206 551 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 RAB33AQ14088 237 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 DCDC5Q6ZRR9 648 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 OR56A1Q8NGH5 318 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 RAB8BQ92930 207 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 CNDP2Q96KP4 475 aaKnown RBP16■□□□□ 0.15
TCOF1-206ENST00000445265 TUBB1Q9H4B7 451 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 B3GNT3Q9Y2A9 372 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 RWDD3Q9Y3V2 267 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 DAPL1A0PJW8 107 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 NPIPB15A6NHN6 443 aaPredicted RBP16■□□□□ 0.15
TCOF1-206ENST00000445265 FAM170BA6NMN3 283 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 IL3P08700 152 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 ACP5P13686 325 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 CD40LGP29965 261 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 GSTM4Q03013 218 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 ACVR1Q04771 509 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 CBLBQ13191 982 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 CLEC12AQ5QGZ9 265 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 KIAA1161Q6NSJ0 714 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 IGFN1Q86VF2 1251 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 GPR26Q8NDV2 337 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 OR10H4Q8NGA5 316 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 TMEM30AQ9NV96 361 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 BTNL2Q9UIR0 455 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 MAFFQ9ULX9 164 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 NUP205Q92621 2012 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 SRCP12931 536 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 ETFAP13804 333 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 CD70P32970 193 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 TEAD2Q15562 447 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 HDDC2Q7Z4H3 204 aa16■□□□□ 0.15
TCOF1-206ENST00000445265 OAFQ86UD1 273 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms