RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 DOC2AQ14183 400 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 ADPRMQ3LIE5 342 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF468Q5VIY5 522 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-203ENST00000444440 SULT1C3Q6IMI6 304 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 RPUSD3Q6P087 351 aaKnown RBP10.2□□□□□ -0.78
SF3A1-203ENST00000444440 QSOX2Q6ZRP7 698 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 RNF175Q8N4F7 328 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 TBC1D19Q8N5T2 526 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 SNX31Q8N9S9 440 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 ST6GALNAC3Q8NDV1 305 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 NFAM1Q8NET5 270 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-203ENST00000444440 TRPV3Q8NET8 790 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 KCTD4Q8WVF5 259 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 GAL3ST3Q96A11 431 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 PTCHD1Q96NR3 888 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 RNF32Q9H0A6 362 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 KCNK13Q9HB14 408 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 MMP25Q9NPA2 562 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 DNAJC11Q9NVH1 559 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 ANKRD10Q9NXR5 420 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 CD274Q9NZQ7 290 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 C19orf25Q9UFG5 118 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-203ENST00000444440 RNF112Q9ULX5 631 aa10.2□□□□□ -0.78
SF3A1-203ENST00000444440 TRAV17A0A0B4J275 112 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 TCRBV16S1A1N1A0A5B0 115 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 DYTNA2CJ06 578 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 OR5H15A6NDH6 313 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 A8MUA0 341 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ERI3O43414 337 aaKnown RBP10.19□□□□□ -0.78
SF3A1-203ENST00000444440 CCNT2O60583 730 aaKnown RBP10.19□□□□□ -0.78
SF3A1-203ENST00000444440 STK16O75716 305 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 RNH1P13489 461 aaKnown RBP10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ICAM2P13598 275 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 IL10P22301 178 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 CERS1P27544 350 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 COL8A1P27658 744 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 KCNK10P57789 538 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ATP6V0D1P61421 351 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 TUBA3CQ13748 450 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 E2F2Q14209 437 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 PDK4Q16654 411 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 XKR6Q5GH73 641 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ACER2Q5QJU3 275 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 MROH9Q5TGP6 573 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ABHD17BQ5VST6 288 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 FAM219BQ5XKK7 198 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 TUBA3EQ6PEY2 450 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF793Q6ZN11 406 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 RAPH1Q70E73 1250 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 UBE3DQ7Z6J8 389 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF227Q86WZ6 799 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 SCUBE1Q8IWY4 988 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 IFT20Q8IY31 132 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 PLD6Q8N2A8 252 aaKnown RBP10.19□□□□□ -0.78
SF3A1-203ENST00000444440 MDS2Q8NDY4 140 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 M1APQ8TC57 530 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ELP5Q8TE02 316 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 UBTD2Q8WUN7 234 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 CCT6BQ92526 530 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 WDR34Q96EX3 536 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 CSF3RQ99062 836 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 LPAR4Q99677 370 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 CD244Q9BZW8 370 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.19□□□□□ -0.78
SF3A1-203ENST00000444440 EHD1Q9H4M9 534 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 NT5DC2Q9H857 520 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 SNX15Q9NRS6 342 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 AGPAT4Q9NRZ5 378 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF358Q9NW07 568 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 STMN3Q9NZ72 180 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 GPRC5BQ9NZH0 403 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 NUDT4Q9NZJ9 180 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 PLEKHB1Q9UF11 243 aaPredicted RBP10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF223Q9UK11 482 aaPredicted RBP10.19□□□□□ -0.78
SF3A1-203ENST00000444440 CACNA1CQ13936 2221 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 ZNF407Q9C0G0 2248 aa10.19□□□□□ -0.78
SF3A1-203ENST00000444440 MYOCOSA0A1B0GUC4 107 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 SAGE2PA6NJ88 616 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 SUPT3HB4E1H0 165 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 RTCAO00442 366 aaKnown RBP10.18□□□□□ -0.78
SF3A1-203ENST00000444440 PRMT3O60678 531 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 KERAO60938 352 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 SH3BGRLO75368 114 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 SUPT3HO75486 399 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 CLEC3AO75596 197 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 ALDOAP04075 364 aaKnown RBP10.18□□□□□ -0.78
SF3A1-203ENST00000444440 C2P06681 752 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 UQCRHP07919 91 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 LTA4HP09960 611 aaKnown RBP10.18□□□□□ -0.78
SF3A1-203ENST00000444440 EDN3P14138 238 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 CD96P40200 585 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 PLA2G16P53816 162 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 ACTN3Q08043 901 aaPredicted RBP10.18□□□□□ -0.78
SF3A1-203ENST00000444440 CHIT1Q13231 466 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 EXT1Q16394 746 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 CDKL4Q5MAI5 379 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 FAM180AQ6UWF9 173 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 RELL1Q8IUW5 271 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 CYP4X1Q8N118 509 aa10.18□□□□□ -0.78
SF3A1-203ENST00000444440 TCAIMQ8N3R3 496 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms